RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 AKR7LQ8NHP1 331 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 ZFP3Q96NJ6 502 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 PLSCR4Q9NRQ2 329 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 ZNF319Q9P2F9 582 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 CMAHPQ9Y471 501 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 FAM215AQ9Y5M1 114 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 ZZEF1O43149 2961 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 ZGRF1Q86YA3 2104 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 A0A096LPE4 126 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 A0A1B0GVI7 797 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 A0A1W2PPZ6 126 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 TMEM8BA6NDV4 472 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 TTLL8A6PVC2 850 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 SYT7O43581 403 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 IGLV3-1P01715 115 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 DBHP09172 617 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 FSTP19883 344 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 TNFSF8P32971 234 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 THBS2P35442 1172 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 TIMP3P35625 211 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 ARR3P36575 388 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 HTR5AP47898 357 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 PSMD7P51665 324 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 ZNF45Q02386 682 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 TGFBR3Q03167 851 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 PABPC1L2AQ5JQF8 200 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 IDNKQ5T6J7 187 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 LUZP2Q86TE4 346 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 LRRTM1Q86UE6 522 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 CD163Q86VB7 1156 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 CNEP1R1Q8N9A8 125 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 OR52H1Q8NGJ2 320 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 OR13C3Q8NGS6 347 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 OR51E1Q8TCB6 317 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 SLC7A6Q92536 515 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 SNRNP40Q96DI7 357 aaKnown RBP12.32□□□□□ -0.44
SS18-201ENST00000269137 PGAM5Q96HS1 289 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 GFI1Q99684 422 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 SLC25A18Q9H1K4 315 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 ZNF275Q9NSD4 429 aaPredicted RBP12.32□□□□□ -0.44
SS18-201ENST00000269137 FOXJ3Q9UPW0 622 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 AK6Q9Y3D8 172 aaKnown RBP12.32□□□□□ -0.44
SS18-201ENST00000269137 TRAV8-7A0A075B6U6 113 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 H3BSH0 61 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 MAGEB3O15480 346 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 RGS5O15539 181 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 TNFSF13O75888 250 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 COX5BP10606 129 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 ABOP16442 354 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 SLC6A9P48067 706 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 PER3P56645 1201 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 FOXF2Q12947 444 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 SLC25A35Q3KQZ1 300 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 ASPHD2Q6ICH7 369 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 NAA40Q86UY6 237 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 PARP16Q8N5Y8 322 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 BOD1Q96IK1 185 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 MIXL1Q9H2W2 232 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 PRORYQ9H606 182 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 RNF121Q9H920 327 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 SP140LQ9H930 580 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 ABCB9Q9NP78 766 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 FAIMQ9NVQ4 179 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 CKLFQ9UBR5 152 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 DAPK2Q9UIK4 370 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 V9GY05 133 aa12.31□□□□□ -0.44
SS18-201ENST00000269137 TOXO94900 526 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 UBL3O95164 117 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 HLA-HP01893 362 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 IGFBP3P17936 291 aaPredicted RBP12.3□□□□□ -0.44
SS18-201ENST00000269137 ADRA2CP18825 462 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 PPP3R1P63098 170 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 SPANXN2Q5MJ10 180 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 TMEM53Q6P2H8 277 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 VWA1Q6PCB0 445 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 Q6ZSR3 168 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 DOK3Q7L591 496 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 BTLAQ7Z6A9 289 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 LAX1Q8IWV1 398 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 CCDC36Q8IYA8 594 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 PLPP7Q8NBV4 271 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 CPEB3Q8NE35 698 aaKnown RBP12.3□□□□□ -0.44
SS18-201ENST00000269137 CCDC54Q8NEL0 328 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 CHPT1Q8WUD6 406 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 STARD4Q96DR4 205 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 CEP19Q96LK0 163 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 SLC30A2Q9BRI3 323 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 GPR84Q9NQS5 396 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 TBCCD1Q9NVR7 557 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 B3GNT2Q9NY97 397 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 ABRACLQ9P1F3 81 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 COMMD3Q9UBI1 195 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 IFITM5A6NNB3 132 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 E9PLN8 166 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 AIPO00170 330 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 PFDN1O60925 122 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 CGAP01215 116 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 IL2RAP01589 272 aa12.3□□□□□ -0.44
SS18-201ENST00000269137 TMIGD3P0DMS9 266 aaPredicted RBP12.3□□□□□ -0.44
SS18-201ENST00000269137 CD37P11049 281 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms