RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PLPP7Q8NBV4 271 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 SLC7A6Q92536 515 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 EXTL1Q92935 676 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 CMTM3Q96MX0 182 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 GPR84Q9NQS5 396 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 TAS2R4Q9NYW5 299 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 ATPIF1Q9UII2 106 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 LAMA5O15230 3695 aa14.31□□□□□ -0.12
TPM1-201ENST00000267996 A0A0B4J203 849 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 ISPDA4D126 451 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 C5orf63A6NC05 138 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 E9PLN8 166 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 APOA1P02647 267 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 MAS1P04201 325 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 HES5Q5TA89 166 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 ZNF324BQ6AW86 544 aaPredicted RBP14.3□□□□□ -0.12
TPM1-201ENST00000267996 FAM214BQ7L5A3 538 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 LYSMD2Q8IV50 215 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 GDPD1Q8N9F7 314 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 AKR7LQ8NHP1 331 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 PGAM5Q96HS1 289 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 C12orf49Q9H741 205 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 CKLFQ9UBR5 152 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 RAXQ9Y2V3 346 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 MEGF11A6BM72 1044 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 ANXA2P2A6NMY6 339 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 IL18BPO95998 194 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 EIF4EP06730 217 aaKnown RBP14.3□□□□□ -0.12
TPM1-201ENST00000267996 CALCBP10092 127 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 TPTEP56180 551 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 GTF3C1Q12789 2109 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 SLC36A2Q495M3 483 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 KRTCAP3Q53RY4 240 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 NSUN5P2Q63ZY6 315 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 FAM166AQ6J272 317 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 ZNF529Q6P280 563 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 DOK3Q7L591 496 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 LUZP2Q86TE4 346 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 UBE2J2Q8N2K1 259 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 C9orf106Q8NAJ2 232 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 DNAAF1Q8NEP3 725 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 OR1J2Q8NGS2 313 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 CHPT1Q8WUD6 406 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 FGGYQ96C11 551 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 ABCB10Q9NRK6 738 aa14.3□□□□□ -0.12
TPM1-201ENST00000267996 DOCK7Q96N67 2140 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 PRRC2CQ9Y520 2896 aaKnown RBP14.29□□□□□ -0.12
TPM1-201ENST00000267996 ADRB1P08588 477 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 ITGA5P08648 1049 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 DDOSTP39656 456 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 HTR5AP47898 357 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 SCAND1P57086 179 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 RGS21Q2M5E4 152 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 PABPC1L2AQ5JQF8 200 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 C9orf135Q5VTT2 229 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 STEAP3Q658P3 488 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 OR2A2Q6IF42 318 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 TFAP2EQ6VUC0 442 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 LYPD6Q86Y78 171 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 SERPINA12Q8IW75 414 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 CCDC54Q8NEL0 328 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 OR52H1Q8NGJ2 320 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 ZNF671Q8TAW3 534 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 LGALS14Q8TCE9 139 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 ADAT3Q96EY9 351 aaPredicted RBP14.29□□□□□ -0.12
TPM1-201ENST00000267996 LYZL4Q96KX0 146 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 SOX7Q9BT81 388 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 N6AMT1Q9Y5N5 214 aa14.29□□□□□ -0.12
TPM1-201ENST00000267996 A0A1B0GVG6 124 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 FAM25AB3EWG3 89 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 FAM25CB3EWG5 89 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 FAM25GB3EWG6 89 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 CNOT4O95628 575 aaKnown RBP14.28□□□□□ -0.12
TPM1-201ENST00000267996 COX5BP10606 129 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 KIR2DL2P43627 348 aaPredicted RBP14.28□□□□□ -0.12
TPM1-201ENST00000267996 SLC6A9P48067 706 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 HGFACQ04756 655 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 SF3B4Q15427 424 aaKnown RBP eCLIP14.28□□□□□ -0.121e-9■■□□□ 12.9
TPM1-201ENST00000267996 SFRP5Q5T4F7 317 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 ANKRD16Q6P6B7 361 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 DPPA2Q7Z7J5 298 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 OR4M1Q8NGD0 313 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 OR1K1Q8NGR3 316 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 OR14K1Q8NGZ2 314 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 BCL2L2Q92843 193 aaPredicted RBP14.28□□□□□ -0.12
TPM1-201ENST00000267996 LIN7BQ9HAP6 207 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 LUZP4Q9P127 313 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 EXTL2Q9UBQ6 330 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 OR5V1Q9UGF6 321 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 STEAP1Q9UHE8 339 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 SVILO95425 2214 aa14.28□□□□□ -0.12
TPM1-201ENST00000267996 IGF2RP11717 2491 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 A0A096LPE4 126 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 A0A1W2PPZ6 126 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 LOC390937A0A1W2PQ73 354 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 MBD3L4A6NDZ8 208 aaPredicted RBP14.27□□□□□ -0.12
TPM1-201ENST00000267996 MBD3L3A6NE82 208 aaPredicted RBP14.27□□□□□ -0.12
TPM1-201ENST00000267996 MBD3L5A6NJ08 208 aaPredicted RBP14.27□□□□□ -0.12
TPM1-201ENST00000267996 SLC17A2O00624 439 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 P2RY14Q15391 338 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms