RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 FOXF1Q12946 379 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 GUCA2BQ16661 112 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 TMEM71Q6P5X7 295 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 TFAP2EQ6VUC0 442 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 NAA40Q86UY6 237 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 THAP6Q8TBB0 222 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 ST7LQ8TDW4 575 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 DAZLQ92904 295 aaKnown RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 ZNF578Q96N58 590 aaPredicted RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 KLRF1Q9NZS2 232 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 RPH3AQ9Y2J0 694 aaPredicted RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 SHISA7A6NL88 538 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 OR6C76A6NM76 312 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 RAMP1O60894 148 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 TTRP02766 147 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 MGMTP16455 207 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 NAGAP17050 411 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 CTRB1P17538 263 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 IGFBP3P17936 291 aaPredicted RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 CASRP41180 1078 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 RPL35P42766 123 aaKnown RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 EMP2P54851 167 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 HSF1Q00613 529 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 CTRB2Q6GPI1 263 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 KLHL24Q6TFL4 600 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 GRINAQ7Z429 371 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 NAXDQ8IW45 347 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 SLC25A21Q9BQT8 299 aaPredicted RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 TNFSF18Q9UNG2 199 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 FAM96BQ9Y3D0 163 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 RALGAPA1Q6GYQ0 2036 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 OR14I1A6ND48 311 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 DNASE2O00115 360 aaPredicted RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 ZNF208O43345 1280 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 HCKP08631 526 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 GIMD1P0DJR0 217 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 PRKACAP17612 351 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 CNR1P21554 472 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 IGFBP4P22692 258 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 CRABP1P29762 137 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 ROM1Q03395 351 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 CLVS2Q5SYC1 327 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 FAM122CQ6P4D5 195 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 GLIPR1L1Q6UWM5 242 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 CLEC9AQ6UXN8 241 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 GKN2Q86XP6 184 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 SLC38A9Q8NBW4 561 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 OR1N1Q8NGS0 311 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 OR10R2Q8NGX6 335 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 OR4K15Q8NH41 348 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 ZDHHC12Q96GR4 267 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 LIN37Q96GY3 246 aaPredicted RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 TSNAXQ99598 290 aaKnown RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 CDCA3Q99618 268 aaPredicted RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 PBOV1Q9GZY1 135 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 ZNF768Q9H5H4 540 aaKnown RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 ACKR4Q9NPB9 350 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 RASL12Q9NYN1 266 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 ZNF319Q9P2F9 582 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 ASH2LQ9UBL3 628 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 FER1L5A0AVI2 2057 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 G3V3Y1 287 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 GDF9O60383 454 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 CRTAPO75718 401 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 KNG1P01042 644 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 HSD11B1P28845 292 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZNF93P35789 620 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 S100A10P60903 97 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 SNTB1Q13884 538 aaKnown RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZNF260Q3ZCT1 412 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 LYG2Q86SG7 212 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 RRNAD1Q96FB5 475 aaKnown RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 PHB2Q99623 299 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ARPC5LQ9BPX5 153 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 LDAHQ9H6V9 325 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 FGF21Q9NSA1 209 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 NBEAQ8NFP9 2946 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 IGKV3D-11A0A0A0MRZ8 115 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 MSGN1A6NI15 193 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZNF705EA8MWA4 302 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 EIF4E2O60573 245 aaKnown RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 NPIPB7O75200 414 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 MT-ATP6P00846 226 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 HOXB5P09067 269 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZNF20P17024 532 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZBTB25P24278 435 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 FASLGP48023 281 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 PPIAP62937 165 aaKnown RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 RNF4P78317 190 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 HSD11B2P80365 405 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ARFRP1Q13795 201 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 PLEKHN1Q494U1 663 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 PRAMEF20Q5VT98 475 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZNF704Q6ZNC4 412 aaPredicted RBP8.11□□□□□ -1.11
MSH4-201ENST00000263187 ZFP82Q8N141 532 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 BATF2Q8N1L9 274 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 OR1M1Q8NGA1 313 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 OR10S1Q8NGN2 331 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 ASB10Q8WXI3 467 aa8.11□□□□□ -1.11
MSH4-201ENST00000263187 PELOQ9BRX2 385 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms