RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RNF121Q9H920 327 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 TCF7L1Q9HCS4 588 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 ZNF835Q9Y2P0 537 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 AK6Q9Y3D8 172 aaKnown RBP19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 C5orf63A6NC05 138 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 NOTOA8MTQ0 251 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 CLDN25C9JDP6 229 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 E9PLN8 166 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 PDCD5O14737 125 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 CD2P06729 351 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 TMIGD3P0DMS9 266 aaPredicted RBP19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 SLC6A9P48067 706 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 TPTEP56180 551 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 KLRB1Q12918 225 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 GFRALQ6UXV0 394 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 CPEB3Q8NE35 698 aaKnown RBP19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 PGAM5Q96HS1 289 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 TP63Q9H3D4 680 aaPredicted RBP19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 NOX3Q9HBY0 568 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 N6AMT1Q9Y5N5 214 aa19.97■□□□□ 0.79
SMARCB1-201ENST00000263121 ANKRD61A6NGH8 418 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 SYT7O43581 403 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 FSTP19883 344 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 COX5AP20674 150 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 THBS2P35442 1172 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 ARR3P36575 388 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 HGFACQ04756 655 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 SLC25A35Q3KQZ1 300 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 HIKESHIQ53FT3 197 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 NAXEQ8NCW5 288 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 KCTD12Q96CX2 325 aaKnown RBP19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 SLC30A2Q9BRI3 323 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 HMG20AQ9NP66 347 aa19.96■□□□□ 0.79
SMARCB1-201ENST00000263121 SVILO95425 2214 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 A0A0U1RQV5 110 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 A0A1B0GVI7 797 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 PRRG2O14669 202 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 LMX1BO60663 402 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 UBL3O95164 117 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 IL2RAP01589 272 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 COX5BP10606 129 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 EPXP11678 715 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 ADRA2CP18825 462 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 HOXD11P31277 338 aaPredicted RBP19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 CEACAM8P31997 349 aaPredicted RBP19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 TGFBR3Q03167 851 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 TBRG1Q3YBR2 411 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 IDNKQ5T6J7 187 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 LUZP2Q86TE4 346 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 DOLPP1Q86YN1 238 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 ACOT12Q8WYK0 555 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 WDFY2Q96P53 400 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 GPR84Q9NQS5 396 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 ZNF275Q9NSD4 429 aaPredicted RBP19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 B3GNT2Q9NY97 397 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 PROCRQ9UNN8 238 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 FOXJ3Q9UPW0 622 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 CMAHPQ9Y471 501 aa19.95■□□□□ 0.78
SMARCB1-201ENST00000263121 TTLL8A6PVC2 850 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 CD79AP11912 226 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 IGFBP3P17936 291 aaPredicted RBP19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 ETV6P41212 452 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 ZNF846Q147U1 533 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 TMEM53Q6P2H8 277 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 C3P1Q6ZMU1 363 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 CCDC190Q86UF4 302 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 LAX1Q8IWV1 398 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 GABRG1Q8N1C3 465 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 ZNF433Q8N7K0 673 aaPredicted RBP19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 BOD1Q96IK1 185 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 WDR12Q9GZL7 423 aaKnown RBP19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 MIXL1Q9H2W2 232 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 DAPK2Q9UIK4 370 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 RGS5O15539 181 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 GLI4P10075 376 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 APEX1P27695 318 aaKnown RBP19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 TNFSF8P32971 234 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 RAB1AP62820 205 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 DOK3Q7L591 496 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 PARP16Q8N5Y8 322 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 PLPP7Q8NBV4 271 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 OR52H1Q8NGJ2 320 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 NANOS1Q8WY41 292 aaKnown RBP19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 ABCB9Q9NP78 766 aa19.94■□□□□ 0.78
SMARCB1-201ENST00000263121 SLC19A2O60779 497 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 SLC2A2P11168 524 aaPredicted RBP19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 ATF1P18846 271 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 DYNC1I2Q13409 638 aaKnown RBP19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 GABRA6Q16445 453 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 SNAI3Q3KNW1 292 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 DDI2Q5TDH0 399 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 MZT2AQ6P582 158 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 Q6ZSR3 168 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 ZNF610Q8N9Z0 462 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 OR1J2Q8NGS2 313 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 LYZL4Q96KX0 146 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 SOX7Q9BT81 388 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 OR10A2Q9H208 303 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 PLGRKTQ9HBL7 147 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 TAS2R4Q9NYW5 299 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms