RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 FAM157BP0CG42 384 aa21.05■□□□□ 0.96
SCN1B-201ENST00000262631 SNAI3Q3KNW1 292 aa21.05■□□□□ 0.96
SCN1B-201ENST00000262631 COLCA1Q6ZS62 124 aa21.05■□□□□ 0.96
SCN1B-201ENST00000262631 FAM57BQ71RH2 274 aa21.05■□□□□ 0.96
SCN1B-201ENST00000262631 PIAS4Q8N2W9 510 aaPredicted RBP21.05■□□□□ 0.96
SCN1B-201ENST00000262631 PRSS35Q8N3Z0 413 aa21.05■□□□□ 0.96
SCN1B-201ENST00000262631 HS3ST6Q96QI5 342 aa21.05■□□□□ 0.96
SCN1B-201ENST00000262631 C1QTNF5Q9BXJ0 243 aa21.05■□□□□ 0.96
SCN1B-201ENST00000262631 ESRP2Q9H6T0 727 aaKnown RBP21.05■□□□□ 0.96
SCN1B-201ENST00000262631 CADP27708 2225 aa21.05■□□□□ 0.96
SCN1B-201ENST00000262631 FASNP49327 2511 aaKnown RBP21.04■□□□□ 0.96
SCN1B-201ENST00000262631 A0A087WXM4 84 aa21.04■□□□□ 0.96
SCN1B-201ENST00000262631 LCATP04180 440 aa21.04■□□□□ 0.96
SCN1B-201ENST00000262631 LOXP28300 417 aaPredicted RBP21.04■□□□□ 0.96
SCN1B-201ENST00000262631 DYNC1I2Q13409 638 aaKnown RBP21.04■□□□□ 0.96
SCN1B-201ENST00000262631 ZNF829Q3KNS6 432 aaPredicted RBP21.04■□□□□ 0.96
SCN1B-201ENST00000262631 BEX5Q5H9J7 111 aa21.04■□□□□ 0.96
SCN1B-201ENST00000262631 RFPL4BQ6ZWI9 263 aa21.04■□□□□ 0.96
SCN1B-201ENST00000262631 EGFL6Q8IUX8 553 aa21.04■□□□□ 0.96
SCN1B-201ENST00000262631 SVOPQ8N4V2 548 aa21.04■□□□□ 0.96
SCN1B-201ENST00000262631 DCLRE1CQ96SD1 692 aaKnown RBP21.04■□□□□ 0.96
SCN1B-201ENST00000262631 G6PC2Q9NQR9 355 aa21.04■□□□□ 0.96
SCN1B-201ENST00000262631 GTF2A1LQ9UNN4 478 aa21.04■□□□□ 0.96
SCN1B-201ENST00000262631 TRIM64CA6NLI5 447 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 LOC110117498-PIK3R3F6TDL0 507 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 ICMTO60725 284 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 GBX2P52951 348 aaPredicted RBP21.03■□□□□ 0.96
SCN1B-201ENST00000262631 ADAM5Q6NVV9 412 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 KCTD8Q6ZWB6 473 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 ZFP41Q8N8Y5 198 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 OR2G2Q8NGZ5 317 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 SPOCK3Q9BQ16 436 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 FRRS1LQ9P0K9 344 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 SLC22A13Q9Y226 551 aa21.03■□□□□ 0.96
SCN1B-201ENST00000262631 SMPD2O60906 423 aa21.02■□□□□ 0.96
SCN1B-201ENST00000262631 UCP2P55851 309 aa21.02■□□□□ 0.96
SCN1B-201ENST00000262631 WDR38Q5JTN6 314 aa21.02■□□□□ 0.96
SCN1B-201ENST00000262631 ABHD4Q8TB40 342 aa21.02■□□□□ 0.96
SCN1B-201ENST00000262631 PIK3IP1Q96FE7 263 aa21.02■□□□□ 0.96
SCN1B-201ENST00000262631 RADILQ96JH8 1075 aa21.02■□□□□ 0.96
SCN1B-201ENST00000262631 ST6GALNAC2Q9UJ37 374 aa21.02■□□□□ 0.96
SCN1B-201ENST00000262631 OR52A1Q9UKL2 312 aa21.02■□□□□ 0.96
SCN1B-201ENST00000262631 DCHS2Q6V1P9 2916 aa21.02■□□□□ 0.96
SCN1B-201ENST00000262631 APOC1P02654 83 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 KIR3DL2P43630 455 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 ERVS71-1P61550 626 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 NEDD8Q15843 81 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 FDX2Q6P4F2 183 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 CATSPERDQ86XM0 798 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 OR8B12Q8NGG6 310 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 PSMG3-AS1Q96PY0 264 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 KCNS3Q9BQ31 491 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 PBOV1Q9GZY1 135 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 POFUT1Q9H488 388 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 TRIM36Q9NQ86 728 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 TBCCD1Q9NVR7 557 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 EIF3KQ9UBQ5 218 aaKnown RBP21.02■□□□□ 0.95
SCN1B-201ENST00000262631 STARD10Q9Y365 291 aa21.02■□□□□ 0.95
SCN1B-201ENST00000262631 PNMA8CA0A1B0GUJ8 204 aa21.01■□□□□ 0.95
SCN1B-201ENST00000262631 INMTO95050 263 aa21.01■□□□□ 0.95
SCN1B-201ENST00000262631 PLAUP00749 431 aa21.01■□□□□ 0.95
SCN1B-201ENST00000262631 HSMCR30P0CW71 290 aa21.01■□□□□ 0.95
SCN1B-201ENST00000262631 PCSK6P29122 969 aa21.01■□□□□ 0.95
SCN1B-201ENST00000262631 TGM4P49221 684 aa21.01■□□□□ 0.95
SCN1B-201ENST00000262631 UBE2UQ5VVX9 321 aa21.01■□□□□ 0.95
SCN1B-201ENST00000262631 SP5Q6BEB4 398 aaPredicted RBP21.01■□□□□ 0.95
SCN1B-201ENST00000262631 SLC22A25Q6T423 547 aa21.01■□□□□ 0.95
SCN1B-201ENST00000262631 PGAM5Q96HS1 289 aa21.01■□□□□ 0.95
SCN1B-201ENST00000262631 NUFIP1Q9UHK0 495 aaKnown RBP21.01■□□□□ 0.95
SCN1B-201ENST00000262631 ICE1Q9Y2F5 2266 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 SHISA9B4DS77 424 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 GPRIN2O60269 458 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 NR4A1P22736 598 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 COL8A1P27658 744 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 ODF4Q2M2E3 257 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 SPATA46Q5T0L3 261 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 ARL9Q6T311 187 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 ZNF367Q7RTV3 350 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 KBTBD8Q8NFY9 601 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 OR2AE1Q8NHA4 323 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 APOBEC3DQ96AK3 386 aaPredicted RBP21■□□□□ 0.95
SCN1B-201ENST00000262631 MGLLQ99685 303 aa21■□□□□ 0.95
SCN1B-201ENST00000262631 TBX1O43435 398 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 TTRP02766 147 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 CD3EP07766 207 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 NKX6-1P78426 367 aaPredicted RBP20.99■□□□□ 0.95
SCN1B-201ENST00000262631 ACSM1Q08AH1 577 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 ALKBH1Q13686 389 aaKnown RBP20.99■□□□□ 0.95
SCN1B-201ENST00000262631 CDK5R1Q15078 307 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 BCL2L15Q5TBC7 163 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 RPS4Y2Q8TD47 263 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 OPALINQ96PE5 141 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 HRNRQ86YZ3 2850 aaPredicted RBP20.99■□□□□ 0.95
SCN1B-201ENST00000262631 OGG1O15527 345 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 RGS6P49758 472 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 NR1H2P55055 460 aa20.99■□□□□ 0.95
SCN1B-201ENST00000262631 MRPL28Q13084 256 aaKnown RBP20.99■□□□□ 0.95
SCN1B-201ENST00000262631 SNTB2Q13425 540 aaKnown RBP20.99■□□□□ 0.95
SCN1B-201ENST00000262631 DAZAP2Q15038 168 aaPredicted RBP20.99■□□□□ 0.95
SCN1B-201ENST00000262631 CCDC58Q4VC31 144 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms