RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 USB1Q9BQ65 265 aaKnown RBP15.57■□□□□ 0.08
TRAM1-201ENST00000262213 RNF126Q9BV68 326 aa15.57■□□□□ 0.08
TRAM1-201ENST00000262213 SPTBN5Q9NRC6 3674 aaKnown RBP15.57■□□□□ 0.08
TRAM1-201ENST00000262213 OR5K4A6NMS3 321 aa15.57■□□□□ 0.08
TRAM1-201ENST00000262213 TMEM150CB9EJG8 249 aa15.57■□□□□ 0.08
TRAM1-201ENST00000262213 SPP1P10451 314 aa15.57■□□□□ 0.08
TRAM1-201ENST00000262213 CTHP32929 405 aa15.57■□□□□ 0.08
TRAM1-201ENST00000262213 CTAG1AP78358 180 aa15.57■□□□□ 0.08
TRAM1-201ENST00000262213 TMEM106CQ9BVX2 250 aa15.57■□□□□ 0.08
TRAM1-201ENST00000262213 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.57■□□□□ 0.08
TRAM1-201ENST00000262213 DHCR7Q9UBM7 475 aaKnown RBP15.57■□□□□ 0.08
TRAM1-201ENST00000262213 PCDH15Q96QU1 1955 aa15.57■□□□□ 0.08
TRAM1-201ENST00000262213 FGF16O43320 207 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 SSX5O60225 188 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 SRSF10O75494 262 aaKnown RBP15.56■□□□□ 0.08
TRAM1-201ENST00000262213 AHSA1O95433 338 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 DUS4LO95620 317 aaKnown RBP15.56■□□□□ 0.08
TRAM1-201ENST00000262213 FOXL2P58012 376 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 ANGPTL5Q86XS5 388 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 RNF141Q8WVD5 230 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 SLC2A8Q9NY64 477 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 OR5AC2Q9NZP5 309 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 CYB5R1Q9UHQ9 305 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 KLF2Q9Y5W3 355 aaPredicted RBP15.56■□□□□ 0.08
TRAM1-201ENST00000262213 A0A0A6YYH2 397 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 FRG2CA6NGY1 282 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 A6NJ64 397 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 NUDT21O43809 227 aaKnown RBP15.56■□□□□ 0.08
TRAM1-201ENST00000262213 CRABP1P29762 137 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 HOXA1P49639 335 aaPredicted RBP15.56■□□□□ 0.08
TRAM1-201ENST00000262213 FZD2Q14332 565 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 SGCAQ16586 387 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 ZNF704Q6ZNC4 412 aaPredicted RBP15.56■□□□□ 0.08
TRAM1-201ENST00000262213 ADIPOR1Q96A54 375 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 EMC6Q9BV81 110 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 BANF2Q9H503 90 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 GSKIPQ9P0R6 139 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 LRP4O75096 1905 aa15.56■□□□□ 0.08
TRAM1-201ENST00000262213 THADAQ6YHU6 1953 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 IGHV5-51A0A0C4DH38 117 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 SYT7O43581 403 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 DXOO77932 396 aaKnown RBP15.55■□□□□ 0.08
TRAM1-201ENST00000262213 MT-ATP6P00846 226 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 HLA-GP17693 338 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 RABIFP47224 123 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 EMP2P54851 167 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 PDZK1IP1Q13113 114 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 PHF19Q5T6S3 580 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 TMEM244Q5VVB8 128 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 C16orf47Q6ZP98 133 aaPredicted RBP15.55■□□□□ 0.08
TRAM1-201ENST00000262213 TCTN2Q96GX1 697 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 TMEM41AQ96HV5 264 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 TEX13DA0A0J9YY54 714 aaPredicted RBP15.55■□□□□ 0.08
TRAM1-201ENST00000262213 NPIPA5E9PKD4 350 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 HTR3BO95264 441 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 MPIG6BO95866 241 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 CRYBA1P05813 215 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 SLC2A1P11166 492 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 POLR2HP52434 150 aaKnown RBP15.55■□□□□ 0.08
TRAM1-201ENST00000262213 SLC26A5P58743 744 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 RBM39Q14498 530 aaKnown RBP15.55■□□□□ 0.08
TRAM1-201ENST00000262213 C9orf40Q8IXQ3 194 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 NKAIN3Q8N8D7 197 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 ZNF248Q8NDW4 579 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 SLC26A10Q8NG04 563 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 OR1M1Q8NGA1 313 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 OR51F2Q8NH61 342 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 ST7LQ8TDW4 575 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 NUDT22Q9BRQ3 303 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 CYTL1Q9NRR1 136 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 LANCL2Q9NS86 450 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 UQCC1Q9NVA1 299 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 NPIPA1Q9UND3 350 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 RHBDD3Q9Y3P4 386 aa15.55■□□□□ 0.08
TRAM1-201ENST00000262213 A8MVM7 634 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 ZNF217O75362 1048 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 H2AFB1P0C5Y9 115 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 CD79AP11912 226 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 RFC3P40938 356 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 S100A10P60903 97 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 MICBQ29980 383 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 GFOD2Q3B7J2 385 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 RXFP4Q8TDU9 374 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 ADAMTS18Q8TE60 1221 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 ZNF721Q8TF20 911 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 ZNF107Q9UII5 783 aaPredicted RBP15.54■□□□□ 0.08
TRAM1-201ENST00000262213 EYSQ5T1H1 3165 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 A0A1W2PP11 408 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 SNAPINO95295 136 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 DDAH2O95865 285 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 RAB6AP20340 208 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 POU3F1Q03052 451 aaPredicted RBP15.54■□□□□ 0.08
TRAM1-201ENST00000262213 ZNF528Q3MIS6 628 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 MAFIPQ8WZ33 124 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 ARL5BQ96KC2 179 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 SOX7Q9BT81 388 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 METTL8Q9H825 291 aaKnown RBP15.54■□□□□ 0.08
TRAM1-201ENST00000262213 BIN3Q9NQY0 253 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 ATPIF1Q9UII2 106 aa15.54■□□□□ 0.08
TRAM1-201ENST00000262213 CYP8B1Q9UNU6 501 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms