RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 OR1F12Q8NHA8 337 aa17.93■□□□□ 0.46
RTCA-201ENST00000260563 RNF166Q96A37 237 aaPredicted RBP17.93■□□□□ 0.46
RTCA-201ENST00000260563 NIPAL2Q9H841 368 aa17.93■□□□□ 0.46
RTCA-201ENST00000260563 ST6GALNAC2Q9UJ37 374 aa17.93■□□□□ 0.46
RTCA-201ENST00000260563 RNF115Q9Y4L5 304 aa17.93■□□□□ 0.46
RTCA-201ENST00000260563 SIRT4Q9Y6E7 314 aaPredicted RBP17.93■□□□□ 0.46
RTCA-201ENST00000260563 CADP27708 2225 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 BAHCC1Q9P281 2608 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 CRYAAP02489 173 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 CELP19835 753 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 STOMP27105 288 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 ECH1Q13011 328 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 CDK5R1Q15078 307 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 SSX1Q16384 188 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 ZNF787Q6DD87 383 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 PHC2Q8IXK0 858 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 IL17RDQ8NFM7 739 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 YIPF6Q96EC8 236 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 C14orf79Q96F83 325 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 HS3ST6Q96QI5 342 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 KCNJ15Q99712 375 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 COQ7Q99807 217 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 R4GMQ9 66 aa17.92■□□□□ 0.46
RTCA-201ENST00000260563 OR6C6A6NF89 314 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 OGG1O15527 345 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 SRSF10O75494 262 aaKnown RBP17.91■□□□□ 0.46
RTCA-201ENST00000260563 COX5BP10606 129 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 CD36P16671 472 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 LOXP28300 417 aaPredicted RBP17.91■□□□□ 0.46
RTCA-201ENST00000260563 TGFBR2P37173 567 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 NANOS3P60323 173 aaKnown RBP17.91■□□□□ 0.46
RTCA-201ENST00000260563 GPR50Q13585 617 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 ZNF829Q3KNS6 432 aaPredicted RBP17.91■□□□□ 0.46
RTCA-201ENST00000260563 CRYBG3Q68DQ2 2970 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 ADAM5Q6NVV9 412 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 OR1J2Q8NGS2 313 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 CDH20Q9HBT6 801 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 ATPIF1Q9UII2 106 aa17.91■□□□□ 0.46
RTCA-201ENST00000260563 IGHV2OR16-5A0A0B4J2B6 119 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 TRBV2A0A0J9YWF9 115 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 PLPP2O43688 288 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 CCL2P13500 99 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 GDI2P50395 445 aaKnown RBP17.9■□□□□ 0.46
RTCA-201ENST00000260563 GALK2Q01415 458 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 TLE4Q04727 773 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 ALKBH1Q13686 389 aaKnown RBP17.9■□□□□ 0.46
RTCA-201ENST00000260563 DMKNQ6E0U4 476 aaPredicted RBP17.9■□□□□ 0.46
RTCA-201ENST00000260563 FDX2Q6P4F2 183 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 SLC22A25Q6T423 547 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 TMEM200AQ86VY9 491 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 SPTSSAQ969W0 71 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 SMIM19Q96E16 107 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 RADILQ96JH8 1075 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 NDUFB11Q9NX14 153 aa17.9■□□□□ 0.46
RTCA-201ENST00000260563 TMEM269A0A1B0GVZ9 245 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 FAM221AA4D161 298 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 ATP6V1G2-DDX39BF2Z307 99 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 F5H5K5 113 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 CTAG2O75638 210 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 PNPP00491 289 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 CCNOP22674 350 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 CALCRP30988 508 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 CX3CR1P49238 355 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 PRKXP51817 358 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 PSMA6P60900 246 aaKnown RBP17.89■□□□□ 0.45
RTCA-201ENST00000260563 MFGE8Q08431 387 aaPredicted RBP17.89■□□□□ 0.45
RTCA-201ENST00000260563 GPR107Q5VW38 600 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 ZNF544Q6NX49 715 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 ARL9Q6T311 187 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 ZNF295-AS1Q8N0V1 137 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 PRSS35Q8N3Z0 413 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 ZNF283Q8N7M2 679 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 KBTBD8Q8NFY9 601 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 OR2G2Q8NGZ5 317 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 RPS4Y2Q8TD47 263 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 TMEM204Q9BSN7 226 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 FUNDC2Q9BWH2 189 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 FAM206AQ9NX38 181 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 FRRS1LQ9P0K9 344 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 POU2F3Q9UKI9 436 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 ABCA4P78363 2273 aa17.89■□□□□ 0.45
RTCA-201ENST00000260563 SMIM31A0A1B0GVY4 71 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 C5orf49A4QMS7 147 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 A6NHS1 94 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 LOC110117498-PIK3R3F6TDL0 507 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 SSTR2P30874 369 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 OTX1P32242 354 aaPredicted RBP17.88■□□□□ 0.45
RTCA-201ENST00000260563 MMP16P51512 607 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 SLC3A1Q07837 685 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 RSPO1Q2MKA7 263 aaPredicted RBP17.88■□□□□ 0.45
RTCA-201ENST00000260563 KRTAP27-1Q3LI81 207 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 ZNF704Q6ZNC4 412 aaPredicted RBP17.88■□□□□ 0.45
RTCA-201ENST00000260563 CATSPERDQ86XM0 798 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 CLVS1Q8IUQ0 354 aaPredicted RBP17.88■□□□□ 0.45
RTCA-201ENST00000260563 SLC7A6Q92536 515 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 POM121L2Q96KW2 1035 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 PGLYRP3Q96LB9 341 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 C4orf45Q96LM5 186 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 DOK1Q99704 481 aa17.88■□□□□ 0.45
RTCA-201ENST00000260563 CLEC4MQ9H2X3 399 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms