RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 NGFP01138 241 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 CRYAAP02489 173 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 APOC1P02654 83 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 GBX2P52951 348 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 NANOS3P60323 173 aaKnown RBP13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 SNAI3Q3KNW1 292 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 KCTD8Q6ZWB6 473 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 FAM222BQ8WU58 562 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 C1QTNF5Q9BXJ0 243 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 OR51B6Q9H340 312 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 ESRP2Q9H6T0 727 aaKnown RBP13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 ZNF319Q9P2F9 582 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 N6AMT1Q9Y5N5 214 aa13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 SIRT4Q9Y6E7 314 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-201ENST00000260054 ATP6V1G2-DDX39BF2Z307 99 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 LOC110117498-PIK3R3F6TDL0 507 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 ICMTO60725 284 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 SMPD2O60906 423 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 ANXA2P07355 339 aaKnown RBP13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 FAM157BP0CG42 384 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 BEX5Q5H9J7 111 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 WDR38Q5JTN6 314 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 UBE2UQ5VVX9 321 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 FAM57BQ71RH2 274 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 PRSS35Q8N3Z0 413 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 ZFP41Q8N8Y5 198 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 OR2G2Q8NGZ5 317 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 TRIM36Q9NQ86 728 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 G6PC2Q9NQR9 355 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 ST6GALNAC2Q9UJ37 374 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 GTF2A1LQ9UNN4 478 aa13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 HEATR1Q9H583 2144 aaKnown RBP13.65□□□□□ -0.22
CCDC90B-201ENST00000260054 GCN1Q92616 2671 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 FASNP49327 2511 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 LCATP04180 440 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 LOXP28300 417 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 TGM4P49221 684 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 ACSM1Q08AH1 577 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 MRPL28Q13084 256 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 NEDD8Q15843 81 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 FDX2Q6P4F2 183 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 RFPL4BQ6ZWI9 263 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 ZNF367Q7RTV3 350 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 CATSPERDQ86XM0 798 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 OR8B12Q8NGG6 310 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 ABHD4Q8TB40 342 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 SPOCK3Q9BQ16 436 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 PBOV1Q9GZY1 135 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 NDUFA13Q9P0J0 144 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 FRRS1LQ9P0K9 344 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 EIF3KQ9UBQ5 218 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 OR52A1Q9UKL2 312 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 SLC22A13Q9Y226 551 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 ICE1Q9Y2F5 2266 aa13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 USP9YO00507 2555 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-201ENST00000260054 INMTO95050 263 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 PCSK6P29122 969 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 KIR3DL2P43630 455 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 RGS6P49758 472 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 UCP2P55851 309 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 ALKBH1Q13686 389 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 CCDC58Q4VC31 144 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 ADAM5Q6NVV9 412 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 HAVCR2Q8TDQ0 301 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 APOBEC3DQ96AK3 386 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 PIK3IP1Q96FE7 263 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 RADILQ96JH8 1075 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 HS3ST6Q96QI5 342 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 MGLLQ99685 303 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 KCNS3Q9BQ31 491 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 MOB1AQ9H8S9 216 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 TBCCD1Q9NVR7 557 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 NUFIP1Q9UHK0 495 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 STARD10Q9Y365 291 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 UTP20O75691 2785 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 PNMA8CA0A1B0GUJ8 204 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 TBX1O43435 398 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 TTRP02766 147 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 HSMCR30P0CW71 290 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 NR4A1P22736 598 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 ERVS71-1P61550 626 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 BDH1Q02338 343 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 CDK5R1Q15078 307 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 CNPY1Q3B7I2 92 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 BCL2L15Q5TBC7 163 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 RPL22L1Q6P5R6 122 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 ARL9Q6T311 187 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 SLC22A25Q6T423 547 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 RPS4Y2Q8TD47 263 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 FCGR1BQ92637 280 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 PGAM5Q96HS1 289 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 COG8Q96MW5 612 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 OPALINQ96PE5 141 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 MRPS26Q9BYN8 205 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 POFUT1Q9H488 388 aa13.63□□□□□ -0.23
CCDC90B-201ENST00000260054 ACOD1A6NK06 481 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 OR4C45A6NMZ5 311 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 SHISA9B4DS77 424 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 OGG1O15527 345 aa13.62□□□□□ -0.23
CCDC90B-201ENST00000260054 CD3EP07766 207 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms