RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 TMEM123Q8N131 208 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 SLC38A9Q8NBW4 561 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 SEH1LQ96EE3 360 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 SLCO5A1Q9H2Y9 848 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 METTL12A8MUP2 240 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 SOX15O60248 233 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 CHRM2P08172 466 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 PSMB3P49720 205 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 TOR2AQ5JU69 321 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 TECTBQ96PL2 329 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 HES7Q9BYE0 225 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 SPRY3O43610 288 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 GLAP06280 429 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 F2RP25116 425 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 TRBV5-4A0A0C4DH59 114 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 FZD6O60353 706 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 FLI1Q01543 452 aaPredicted RBP16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 ZFP62Q8NB50 900 aaPredicted RBP16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 VAMP5O95183 116 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 TSPAN12O95859 305 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 ACKR3P25106 362 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 DUSP1P28562 367 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 SARAFQ96BY9 339 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 DERL3Q96Q80 235 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 SLC25A21Q9BQT8 299 aaPredicted RBP16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 NMES1Q9C002 83 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 KLK8O60259 260 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 CD3DP04234 171 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 FCGR2CP31995 323 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 CLEC12BQ2HXU8 276 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 NDUFB11Q9NX14 153 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 SLC17A4Q9Y2C5 497 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 ANKRD36CQ5JPF3 1778 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 PDGFAP04085 211 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 OR5G3P0C626 314 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 RFX2P48378 723 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 GPM6AP51674 278 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 TFF2Q03403 129 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 TMEM268Q5VZI3 342 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 NIPSNAP3BQ9BS92 247 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 YBX2Q9Y2T7 364 aaKnown RBP16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 ARR3P36575 388 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 SHBQ15464 509 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 CEACAM16Q2WEN9 425 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 SLC25A35Q3KQZ1 300 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 NANPQ8TBE9 248 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 SLC7A6Q92536 515 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 FBXO17Q96EF6 278 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 S1PR5Q9H228 398 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 TXNIPQ9H3M7 391 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 KIR2DS1A0A191URI9 304 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 KIR2DS4P43632 304 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 GUCA2AQ02747 115 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 KIR2DS1Q14954 304 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 OR52B4Q8NGK2 314 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 MARCH1Q8TCQ1 289 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 ADAM19Q9H013 955 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 ECM29Q5VYK3 1845 aa16.9■□□□□ 0.3
SMARCC1-201ENST00000254480 A0A087WV62 115 aa16.89■□□□□ 0.3
SMARCC1-201ENST00000254480 A0A0A6YYJ9 748 aa16.89■□□□□ 0.3
SMARCC1-201ENST00000254480 STAC2Q6ZMT1 411 aa16.89■□□□□ 0.3
SMARCC1-201ENST00000254480 CADM3Q8N126 398 aa16.89■□□□□ 0.3
SMARCC1-201ENST00000254480 A0A0A6YYD5 115 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 FRG2CA6NGY1 282 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 HEXAP06865 529 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 PPP1CAP62136 330 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 Q6ZRG5 221 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 GABARAPL3Q9BY60 117 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 C4orf47A7E2U8 309 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 PRSS12P56730 875 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 FAM109BQ6ICB4 259 aaPredicted RBP16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 SLC51BQ86UW2 128 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 MED9Q9NWA0 146 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 F5P12259 2224 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF724A8MTY0 619 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 JUNBP17275 347 aaPredicted RBP16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF816Q0VGE8 651 aaPredicted RBP16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 SLC17A1Q14916 467 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 LHFPL2Q6ZUX7 228 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 OR52H1Q8NGJ2 320 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 CHST6Q9GZX3 395 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 MAST2Q6P0Q8 1798 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 NRAPQ86VF7 1730 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 GFRALQ6UXV0 394 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 SLC43A2Q8N370 569 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 OR2AE1Q8NHA4 323 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 R4GMQ9 66 aa16.89■□□□□ 0.29
SMARCC1-201ENST00000254480 AKAP11Q9UKA4 1901 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 IGHV5-51A0A0C4DH38 117 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 RAB5CP51148 216 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 ST8SIA1Q92185 356 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 SELEP16581 610 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 TMEM41BQ5BJD5 291 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 ZDHHC23Q8IYP9 409 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 DEFB124Q8NES8 71 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 OR8U1Q8NH10 309 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 ST3GAL6Q9Y274 331 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms