RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ACSM4P0C7M7 580 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 ZNF14P17017 642 aaPredicted RBP11.26□□□□□ -0.61
LSM8-201ENST00000249299 CFL1P23528 166 aaKnown RBP11.26□□□□□ -0.61
LSM8-201ENST00000249299 STOMP27105 288 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 MAPK3P27361 379 aaPredicted RBP11.26□□□□□ -0.61
LSM8-201ENST00000249299 APLNRP35414 380 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 UGT2B10P36537 528 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 CX3CR1P49238 355 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 NANOS3P60323 173 aaKnown RBP11.26□□□□□ -0.61
LSM8-201ENST00000249299 SORDQ00796 357 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 WDR38Q5JTN6 314 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 BCL2L15Q5TBC7 163 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 Q6ZSR3 168 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 LUZP2Q86TE4 346 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 ZNF843Q8N446 348 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 ZNF283Q8N7M2 679 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 CPEB3Q8NE35 698 aaKnown RBP11.26□□□□□ -0.61
LSM8-201ENST00000249299 GPR148Q8TDV2 347 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 ISOC1Q96CN7 298 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 POM121L2Q96KW2 1035 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 C1QTNF5Q9BXJ0 243 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 TTTY10Q9BZA0 68 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 OPA3Q9H6K4 179 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 SLC25A15Q9Y619 301 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 LOC390937A0A1W2PQ73 354 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 DHRS7CA6NNS2 312 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 RGS9O75916 674 aaPredicted RBP11.25□□□□□ -0.61
LSM8-201ENST00000249299 PATE4P0C8F1 98 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 ACHEP22303 614 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 CCL1P22362 96 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 GADD45AP24522 165 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 PCSK6P29122 969 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 PSMB10P40306 273 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 PEX19P40855 299 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 ZNF121P58317 390 aaPredicted RBP11.25□□□□□ -0.61
LSM8-201ENST00000249299 SLC3A1Q07837 685 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 CTF1Q16619 201 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 TBC1D28Q2M2D7 210 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 UNQ9370/PRO34162Q6UXP9 181 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 SLC16A12Q6ZSM3 486 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 SPATC1Q76KD6 591 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 MDP1Q86V88 176 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 PRSS35Q8N3Z0 413 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 ZNF676Q8N7Q3 588 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 AKR7LQ8NHP1 331 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 ABHD4Q8TB40 342 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
LSM8-201ENST00000249299 C10orf35Q96D05 121 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 CCDC120Q96HB5 630 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 BBC3Q96PG8 261 aaPredicted RBP11.25□□□□□ -0.61
LSM8-201ENST00000249299 PBOV1Q9GZY1 135 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 OR10A2Q9H208 303 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 TBCCD1Q9NVR7 557 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 HHLA2Q9UM44 414 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 GRIP1Q9Y3R0 1128 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 FREM1Q5H8C1 2179 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 CFAP46Q8IYW2 2715 aa11.25□□□□□ -0.61
LSM8-201ENST00000249299 INTS1Q8N201 2190 aaKnown RBP11.24□□□□□ -0.61
LSM8-201ENST00000249299 TRBV5-5A0A0J9YX44 114 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 ZNF503-AS2A6NEH8 195 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 F5H5K5 113 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 LRRTM2O43300 516 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 XRCC2O43543 280 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 ARL6IP5O75915 188 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 IGLV3-1P01715 115 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 KIR3DL2P43630 455 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 PRKXP51817 358 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 TUBA1BP68363 451 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 ADORA2A-AS1P86434 159 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 GALK2Q01415 458 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 Q499Y3 187 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 TUBA1AQ71U36 451 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 FJX1Q86VR8 437 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 ZNF584Q8IVC4 421 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 SLC30A7Q8NEW0 376 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 CA5BP1Q8WTZ4 195 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 APOBEC3DQ96AK3 386 aaPredicted RBP11.24□□□□□ -0.61
LSM8-201ENST00000249299 S100PBPQ96BU1 408 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 ACTR6Q9GZN1 396 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 NGBQ9NPG2 151 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 SLC22A13Q9Y226 551 aa11.24□□□□□ -0.61
LSM8-201ENST00000249299 LOC100509620A0A075B734 347 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 TMEM127O75204 238 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 MTRF1O75570 445 aaKnown RBP11.23□□□□□ -0.61
LSM8-201ENST00000249299 GPX5O75715 221 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 TTRP02766 147 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 CD2P06729 351 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 ANXA2P07355 339 aaKnown RBP11.23□□□□□ -0.61
LSM8-201ENST00000249299 GNLYP22749 145 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 SLC6A9P48067 706 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 RPS11P62280 158 aaKnown RBP eCLIP11.23□□□□□ -0.61
LSM8-201ENST00000249299 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
LSM8-201ENST00000249299 FABP5Q01469 135 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 MFGE8Q08431 387 aaPredicted RBP11.23□□□□□ -0.61
LSM8-201ENST00000249299 FAM27E3Q08E93 113 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 PPA1Q15181 289 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 ACSM3Q53FZ2 586 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 SOWAHCQ53LP3 525 aaPredicted RBP11.23□□□□□ -0.61
LSM8-201ENST00000249299 DOK3Q7L591 496 aa11.23□□□□□ -0.61
LSM8-201ENST00000249299 ZFP41Q8N8Y5 198 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms