RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 SYT13Q7L8C5 426 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 PAQR7Q86WK9 346 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 OR6K3Q8NGY3 331 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 SMAP2Q8WU79 429 aaPredicted RBP13.53□□□□□ -0.24
PMPCB-201ENST00000249269 ZBP1Q9H171 429 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 TMEM27Q9HBJ8 222 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 PRSS16Q9NQE7 514 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 FBXL4Q9UKA2 621 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 PRICKLE3O43900 615 aaPredicted RBP13.53□□□□□ -0.24
PMPCB-201ENST00000249269 IFNA5P01569 189 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 ALDOBP05062 364 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 CHRM2P08172 466 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 MAKP20794 623 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 BCL6P41182 706 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 EFNA3P52797 238 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 RPS11P62280 158 aaKnown RBP eCLIP13.53□□□□□ -0.24
PMPCB-201ENST00000249269 FAM27D1Q5T7N8 215 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 MEX3DQ86XN8 651 aaKnown RBP13.53□□□□□ -0.24
PMPCB-201ENST00000249269 GLB1L2Q8IW92 636 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 NT5CQ8TCD5 201 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 LGALS14Q8TCE9 139 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 MIB2Q96AX9 1013 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 POM121L2Q96KW2 1035 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 SDF2Q99470 211 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 ZNF426Q9BUY5 554 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 TRMT61BQ9BVS5 477 aaKnown RBP13.53□□□□□ -0.24
PMPCB-201ENST00000249269 IL17BQ9UHF5 180 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 PADI1Q9ULC6 663 aa13.53□□□□□ -0.24
PMPCB-201ENST00000249269 PRR33A8MZF0 331 aa13.52□□□□□ -0.24
PMPCB-201ENST00000249269 ZIC2O95409 532 aaPredicted RBP13.52□□□□□ -0.24
PMPCB-201ENST00000249269 AGTR1P30556 359 aa13.52□□□□□ -0.24
PMPCB-201ENST00000249269 LINC01555Q8NAE3 123 aa13.52□□□□□ -0.24
PMPCB-201ENST00000249269 OR5M9Q8NGP3 310 aa13.52□□□□□ -0.24
PMPCB-201ENST00000249269 KLK6Q92876 244 aa13.52□□□□□ -0.24
PMPCB-201ENST00000249269 ZG16BQ96DA0 208 aa13.52□□□□□ -0.24
PMPCB-201ENST00000249269 PELI1Q96FA3 418 aa13.52□□□□□ -0.24
PMPCB-201ENST00000249269 DGAT2Q96PD7 388 aa13.52□□□□□ -0.24
PMPCB-201ENST00000249269 V9GY05 133 aa13.52□□□□□ -0.24
PMPCB-201ENST00000249269 NINQ8N4C6 2090 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 IGKV1-8A0A0C4DH67 115 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 FAM171A2A8MVW0 826 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 D6RAR5 112 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 FCMRO60667 390 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 RAD1O60671 282 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 CMPK1P30085 196 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 ACVR1BP36896 505 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 RAB5BP61020 215 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 ZNF616Q08AN1 781 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 CRMP1Q14194 572 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 SMIM21Q3B7S5 101 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 FAM74A1Q5RGS3 127 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 Q6ZTK2 550 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 TMUB2Q71RG4 321 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 CHMP1BQ7LBR1 199 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 LMNTD1Q8N9Z9 388 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 KREMEN2Q8NCW0 462 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 OR13D1Q8NGV5 346 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 OR5J2Q8NH18 312 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 NPRL2Q8WTW4 380 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 DDA1Q9BW61 102 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 OR2S2Q9NQN1 319 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 CCL26Q9Y258 94 aa13.52□□□□□ -0.25
PMPCB-201ENST00000249269 ARPC1BO15143 372 aaKnown RBP13.51□□□□□ -0.25
PMPCB-201ENST00000249269 OTX2P32243 289 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 TDGF1P3P51864 188 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 ART1P52961 327 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 CDK3Q00526 305 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 C5orf47Q569G3 176 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 APOOLQ6UXV4 268 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 CDRT4Q8N9R6 151 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 BEST4Q8NFU0 473 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 TBX5Q99593 518 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 HCAR1Q9BXC0 346 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 FOXJ3Q9UPW0 622 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 HEBP2Q9Y5Z4 205 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 SNRPCP09234 159 aaKnown RBP13.51□□□□□ -0.25
PMPCB-201ENST00000249269 TACSTD2P09758 323 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 UBBP0CG47 229 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 PVALBP20472 110 aaPredicted RBP13.51□□□□□ -0.25
PMPCB-201ENST00000249269 TIMP3P35625 211 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 PTH2RP49190 550 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 RPS27AP62979 156 aaKnown RBP13.51□□□□□ -0.25
PMPCB-201ENST00000249269 UBA52P62987 128 aaKnown RBP13.51□□□□□ -0.25
PMPCB-201ENST00000249269 DUSP2Q05923 314 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 COX19Q49B96 90 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 GSG1LQ6UXU4 331 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 TTLL10Q6ZVT0 673 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 OR52I2Q8NH67 350 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 TEX101Q9BY14 249 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 WDR54Q9H977 334 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 SLC17A5Q9NRA2 495 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 RNF186Q9NXI6 227 aa13.51□□□□□ -0.25
PMPCB-201ENST00000249269 GXYLT2A0PJZ3 443 aa13.5□□□□□ -0.25
PMPCB-201ENST00000249269 CD81P60033 236 aa13.5□□□□□ -0.25
PMPCB-201ENST00000249269 RPS15AP62244 130 aaKnown RBP13.5□□□□□ -0.25
PMPCB-201ENST00000249269 RPE65Q16518 533 aa13.5□□□□□ -0.25
PMPCB-201ENST00000249269 ASCL4Q6XD76 172 aa13.5□□□□□ -0.25
PMPCB-201ENST00000249269 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.5□□□□□ -0.256e-8■■■□□ 16.8
PMPCB-201ENST00000249269 OLIG3Q7RTU3 272 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms