RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 GPR84Q9NQS5 396 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 GPR160Q9UJ42 338 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 MRPS17Q9Y2R5 130 aaKnown RBP11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 A0A1W2PP11 408 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 RFPL4AA6NLU0 287 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 RFPL4AL1F8VTS6 287 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 MS4A18H0YCH9 400 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 FADS1O60427 444 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 NXPH1P58417 271 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 MS4A18Q3C1V0 323 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 SOX7Q9BT81 388 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 SCPEP1Q9HB40 452 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 FSCN3Q9NQT6 498 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 MBD2Q9UBB5 411 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 RARRES3Q9UL19 164 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 A0A1W2PR77 199 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 HMSDA8MTL9 139 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 SULT2B1O00204 365 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 IGHG1P01857 330 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 SFTPBP07988 381 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 M6PRP20645 277 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 ROM1Q03395 351 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 CSRP2Q16527 193 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 TEX30Q5JUR7 227 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 ZNF660Q6AZW8 331 aaPredicted RBP11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 RTN4RL2Q86UN3 420 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 NKAIN3Q8N8D7 197 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 ZNF285Q96NJ3 590 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 SLC39A1Q9NY26 324 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 VSIG4Q9Y279 399 aa11.24□□□□□ -0.61
RAB3IP-201ENST00000247833 A0A1W2PQD3 144 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 SRFP11831 508 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 GLB1P16278 677 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 PRSS12P56730 875 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 SCAND1P57086 179 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 RAET1LQ5VY80 246 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 RAB3CQ96E17 227 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 RBM24Q9BX46 236 aaKnown RBP11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 ACKR4Q9NPB9 350 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 IGHV3-15A0A0B4J1V0 119 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 A0A0B4J2A0 478 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 WDPCPO95876 746 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 SERPINA2P20848 420 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 APOBEC1P41238 236 aaKnown RBP11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 AFF3P51826 1226 aaKnown RBP11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 CLDN17P56750 224 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 OR51T1Q8NGJ9 327 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 PAQR8Q8TEZ7 354 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 FOXRED1Q96CU9 486 aaPredicted RBP11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 TMEM59Q9BXS4 323 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 SLC6A15Q9H2J7 730 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 SLCO5A1Q9H2Y9 848 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 SHPKQ9UHJ6 478 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 SRPK3Q9UPE1 567 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 NCOR1O75376 2440 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 KRBOX1C9JBD0 128 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 D6RAR5 112 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 TLX3O43711 291 aaPredicted RBP11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 EPHA4P54764 986 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 MFAP5Q13361 173 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 STPG2Q8N412 459 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 PNLDC1Q8NA58 520 aaKnown RBP11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 SLC38A9Q8NBW4 561 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 OR5L2Q8NGL0 311 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 ELP5Q8TE02 316 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 ST8SIA1Q92185 356 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 G6PC2Q9NQR9 355 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 PI4KAP42356 2102 aa11.23□□□□□ -0.61
RAB3IP-201ENST00000247833 ANKUB1A6NFN9 424 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 NUDT21O43809 227 aaKnown RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 TTRP02766 147 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 HOXB5P09067 269 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 QDPRP09417 244 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 VSIG8P0DPA2 414 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 LAP3P28838 519 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 ZNF121P58317 390 aaPredicted RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 CSNK2A1P68400 391 aaPredicted RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 GABREP78334 506 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 RSPO4Q2I0M5 234 aaPredicted RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 D2HGDHQ8N465 521 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 ADAD2Q8NCV1 583 aaKnown RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 CSNK2A3Q8NEV1 391 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 MFSD8Q8NHS3 518 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 TMPRSS13Q9BYE2 586 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 SLC17A5Q9NRA2 495 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 RHBDD3Q9Y3P4 386 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 TIAF1O95411 115 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 ITGB2P05107 769 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 CFIP05156 583 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 ZP3P21754 424 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 SERPINF1P36955 418 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 MC2RQ01718 297 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 TAGLNQ01995 201 aaKnown RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 RGS7BPQ6MZT1 257 aaPredicted RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 GLRX5Q86SX6 157 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 SLC25A45Q8N413 288 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 OR2I1PQ8NGU4 316 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 OR5H2Q8NGV7 314 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 TWSG1Q9GZX9 223 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 SLC5A6Q9Y289 635 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms