RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ITFG2Q969R8 447 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 FOXRED1Q96CU9 486 aaPredicted RBP12.42□□□□□ -0.42
SDF2-201ENST00000247020 ORAI1Q96D31 301 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 BOD1Q96IK1 185 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 ZFP3Q96NJ6 502 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 WNT5BQ9H1J7 359 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 CYSLTR2Q9NS75 346 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 ETV7Q9Y603 341 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 APC2O95996 2303 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 LOC390937A0A1W2PQ73 354 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 DHRS7CA6NNS2 312 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 F5H5K5 113 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 MTRF1O75570 445 aaKnown RBP12.41□□□□□ -0.42
SDF2-201ENST00000247020 UBL3O95164 117 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 TALDO1P37837 337 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 DDOSTP39656 456 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 SLC6A9P48067 706 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 CAPZA1P52907 286 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 GLT8D1Q68CQ7 371 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 ZNF774Q6NX45 483 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 TMEM53Q6P2H8 277 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 CNIH2Q6PI25 160 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 BAIAP2L2Q6UXY1 529 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 TFAP2EQ6VUC0 442 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 PGAP1Q75T13 922 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 CCDC36Q8IYA8 594 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 MINDY2Q8NBR6 621 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 OR5D14Q8NGL3 314 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 OR1K1Q8NGR3 316 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 OR51E1Q8TCB6 317 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 NANOS1Q8WY41 292 aaKnown RBP12.41□□□□□ -0.42
SDF2-201ENST00000247020 EXTL1Q92935 676 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 SRRQ9GZT4 340 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 OR10A2Q9H208 303 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 ZNF224Q9NZL3 707 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 PRSS50Q9UI38 385 aa12.41□□□□□ -0.42
SDF2-201ENST00000247020 ACACAQ13085 2346 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 FIGNL2A6NMB9 653 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 MAS1P04201 325 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 SLC2A2P11168 524 aaPredicted RBP12.4□□□□□ -0.42
SDF2-201ENST00000247020 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
SDF2-201ENST00000247020 HTR5AP47898 357 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 TGFBR3Q03167 851 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 ZNF79Q15937 498 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 RGS21Q2M5E4 152 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 UBE2NLQ5JXB2 153 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 ASPHD2Q6ICH7 369 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 ZNF529Q6P280 563 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 CDH26Q8IXH8 852 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 SAMD12Q8N8I0 201 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 OR5M9Q8NGP3 310 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 OR1J2Q8NGS2 313 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 ZNF671Q8TAW3 534 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 RGCCQ9H4X1 137 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 C12orf49Q9H741 205 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 RNF121Q9H920 327 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 GPR84Q9NQS5 396 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 STEAP1Q9UHE8 339 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 RAXQ9Y2V3 346 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 DCHS1Q96JQ0 3298 aa12.4□□□□□ -0.42
SDF2-201ENST00000247020 GTF3C1Q12789 2109 aa12.4□□□□□ -0.43
SDF2-201ENST00000247020 URB1O60287 2271 aaKnown RBP12.39□□□□□ -0.43
SDF2-201ENST00000247020 FAM25AB3EWG3 89 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 FAM25CB3EWG5 89 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 FAM25GB3EWG6 89 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 SLC17A2O00624 439 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 DHRS3O75911 302 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 WISP2O76076 250 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 ERCC1P07992 297 aaPredicted RBP12.39□□□□□ -0.43
SDF2-201ENST00000247020 ITGA5P08648 1049 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 SLC2A1P11166 492 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 ZNF20P17024 532 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 ELK1P19419 428 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 NR4A2P43354 598 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 PABPC1L2AQ5JQF8 200 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 Q6ZT83 130 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 C9orf106Q8NAJ2 232 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 FGFBP3Q8TAT2 258 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 SDHCQ99643 169 aaPredicted RBP12.39□□□□□ -0.43
SDF2-201ENST00000247020 PPP1R3EQ9H7J1 279 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 TAS2R4Q9NYW5 299 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 ZNF319Q9P2F9 582 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 V9GYS6 101 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 TBX1O43435 398 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 TPPPO94811 219 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 ALX3O95076 343 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 IL18BPO95998 194 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 PAHP00439 452 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 KIR2DL2P43627 348 aaPredicted RBP12.39□□□□□ -0.43
SDF2-201ENST00000247020 CXADRP78310 365 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 IFITM3Q01628 133 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 HES5Q5TA89 166 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 FRYQ5TBA9 3013 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 FAM166AQ6J272 317 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 ZNF585AQ6P3V2 769 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 COMMD2Q86X83 199 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 LYSMD2Q8IV50 215 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 C1orf162Q8NEQ5 155 aaPredicted RBP12.39□□□□□ -0.43
SDF2-201ENST00000247020 OR6M1Q8NGM8 313 aa12.39□□□□□ -0.43
SDF2-201ENST00000247020 OR14K1Q8NGZ2 314 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms