RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CCL27Q9Y4X3 112 aa11.69□□□□□ -0.54
VAMP4-201ENST00000236192 NSG1A0A0A6YYJ2 146 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 ADM5C9JUS6 153 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 K7ERQ8 282 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 SPINT3P49223 89 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 PCBP3P57721 371 aaKnown RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 MRPL2Q5T653 305 aaKnown RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 PLXDC2Q6UX71 529 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 OLIG3Q7RTU3 272 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 TM4SF18Q96CE8 201 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 NTNG2Q96CW9 530 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 SEH1LQ96EE3 360 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 HIST1H2AAQ96QV6 131 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 FUT9Q9Y231 359 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF814B7Z6K7 855 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 C1QTNF3-AMACRE9PGA6 284 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 TK1P04183 234 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 OR5G3P0C626 314 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 CD99P14209 185 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 KLF3P57682 345 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 FAM3BP58499 235 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 USP50Q70EL3 339 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 CPEB2Q7Z5Q1 589 aaKnown RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF681Q96N22 645 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 GKN1Q9NS71 199 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 LIPGQ9Y5X9 500 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 ARL2-SNX15V9GYD0 113 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 FAM157BP0CG42 384 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF865P0CJ78 1059 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 TMEM225BP0DP42 221 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 BCKDHBP21953 392 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 NKX2-1P43699 371 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 UBE2G2P60604 165 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 Q6ZVL8 140 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 HTR3DQ70Z44 454 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 C1QL4Q86Z23 238 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 OR10G6Q8NH81 332 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 MRGPRX4Q96LA9 322 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 NKX2-4Q9H2Z4 354 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 SERTAD4Q9NUC0 356 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 IL19Q9UHD0 177 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF107Q9UII5 783 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 NTF3P20783 257 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 AADACP22760 399 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 FPR2P25090 351 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 CD52P31358 61 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 LPAR6P43657 344 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 TSFMP43897 325 aaKnown RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 OR5AU1Q8NGC0 362 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 CAPNS2Q96L46 248 aa11.68□□□□□ -0.54
VAMP4-201ENST00000236192 RIMS4Q9H426 269 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-201ENST00000236192 CD300LBA8K4G0 201 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 SOX1O00570 391 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF207O43670 478 aaKnown RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 OR5H8P0DN80 308 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 CD79AP11912 226 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 PI3P19957 117 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 FAM3AP98173 230 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 SLC22A6Q4U2R8 563 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 ABHD12BQ7Z5M8 362 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 KLHDC8AQ8IYD2 350 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 CDRT4Q8N9R6 151 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 GPR32P1Q8NGA4 272 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 OR2T10Q8NGZ9 312 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 OR4F5Q8NH21 305 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 STARD4Q96DR4 205 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 PELI1Q96FA3 418 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 OR4F4Q96R69 305 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 COL22A1Q8NFW1 1626 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 MGST1P10620 155 aaKnown RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 PNMTP11086 282 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 LAG3P18627 525 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 PAFAH1B2P68402 229 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 DUSP28Q4G0W2 176 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 MMP21Q8N119 569 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 ZSCAN4Q8NAM6 433 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 CPEB3Q8NE35 698 aaKnown RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 OR4B1Q8NGF8 309 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 PSMF1Q92530 271 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 AMDHD1Q96NU7 426 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 PLK3Q9H4B4 646 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 RNF122Q9H9V4 155 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 KCNK6Q9Y257 313 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 HSPB2A8KAH6 182 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 FFAR1O14842 300 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 OGG1O15527 345 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 TTRP02766 147 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 ID2Q02363 134 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 ZP2Q05996 745 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 HSPB2Q16082 182 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 SLC39A11Q8N1S5 342 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 VN1R17PQ8TDU5 208 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF480Q8WV37 535 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 APH1AQ96BI3 265 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 ADGRL4Q9HBW9 690 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 TAS2R4Q9NYW5 299 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 OR1A2Q9Y585 309 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 TMEM269A0A1B0GVZ9 245 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms