RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TAAR3PQ9P1P4 343 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 WARS2Q9UGM6 360 aaKnown RBP9.68□□□□□ -0.86
SF3B6-201ENST00000233468 LAMP5Q9UJQ1 280 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.68□□□□□ -0.86
SF3B6-201ENST00000233468 GMPPBQ9Y5P6 360 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 TRIM64A6NGJ6 449 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 TRIM64BA6NI03 449 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 ANKRD65E5RJM6 399 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 LCATP04180 440 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 ADRA2AP08913 450 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 RAC2P15153 192 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 SLC2A5P22732 501 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 EPHA2P29317 976 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 ATP6V1E1P36543 226 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 SLC6A9P48067 706 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 EFNB1P98172 346 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 GGTLC2Q14390 218 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 KRTAP27-1Q3LI81 207 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 ZIK1Q3SY52 487 aaPredicted RBP9.67□□□□□ -0.86
SF3B6-201ENST00000233468 AADACL4Q5VUY2 407 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 CLEC2AQ6UVW9 174 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 RFPL4BQ6ZWI9 263 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 BBS1Q8NFJ9 593 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 THEM6Q8WUY1 208 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 RNF133Q8WVZ7 376 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 ASB17Q8WXJ9 295 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 MAP6Q96JE9 813 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 COX4I2Q96KJ9 171 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 DIRC2Q96SL1 478 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 APOL4Q9BPW4 351 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 RHNO1Q9BSD3 238 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 C1QTNF5Q9BXJ0 243 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 OPA3Q9H6K4 179 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 NIPAL2Q9H841 368 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 PNRC2Q9NPJ4 139 aaKnown RBP9.67□□□□□ -0.86
SF3B6-201ENST00000233468 SMPD3Q9NY59 655 aaPredicted RBP9.67□□□□□ -0.86
SF3B6-201ENST00000233468 HAO2Q9NYQ3 351 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 FZR1Q9UM11 496 aa9.67□□□□□ -0.86
SF3B6-201ENST00000233468 HIVEP2P31629 2446 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 LOC100130705A0A1B0GUX0 176 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 TMEM129A0AVI4 362 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 POM121CA8CG34 1229 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 TIMM8AO60220 97 aaPredicted RBP9.66□□□□□ -0.86
SF3B6-201ENST00000233468 SSX4O60224 188 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 SELENOFO60613 162 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 NGFP01138 241 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 IGHV4-39P01824 125 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 DBHP09172 617 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 H2BFMP0C1H6 154 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 ACSM4P0C7M7 580 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 HTR1FP30939 366 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 POLR2IP36954 125 aaKnown RBP9.66□□□□□ -0.86
SF3B6-201ENST00000233468 NAA10P41227 235 aaPredicted RBP9.66□□□□□ -0.86
SF3B6-201ENST00000233468 RPS27P42677 84 aaKnown RBP9.66□□□□□ -0.86
SF3B6-201ENST00000233468 SNRPGP62308 76 aaKnown RBP9.66□□□□□ -0.86
SF3B6-201ENST00000233468 ELF3P78545 371 aaPredicted RBP9.66□□□□□ -0.86
SF3B6-201ENST00000233468 CLEC12BQ2HXU8 276 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 SLC25A30Q5SVS4 291 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 SPATA46Q5T0L3 261 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 TTC23Q5W5X9 447 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 DEGS2Q6QHC5 323 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 LYPD4Q6UWN0 246 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 KRT77Q7Z794 578 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF283Q8N7M2 679 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF540Q8NDQ6 660 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 ST7LQ8TDW4 575 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 SLC7A6Q92536 515 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 SLC29A1Q99808 456 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 ABHD6Q9BV23 337 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 MROQ9BYG7 248 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 ZDHHC8Q9ULC8 765 aa9.66□□□□□ -0.86
SF3B6-201ENST00000233468 SONP18583 2426 aaKnown RBP9.66□□□□□ -0.86
SF3B6-201ENST00000233468 ATRQ13535 2644 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 C17orf100A8MU93 164 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 INAFM1C9JVW0 142 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF670-ZNF695F2Z2N8 137 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 NDUFS8O00217 210 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 SLC16A6O15403 523 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF254O75437 659 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 CLPTM1O96005 669 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 ALOX5APP20292 161 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 TNFSF4P23510 183 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 CFL1P23528 166 aaKnown RBP9.65□□□□□ -0.86
SF3B6-201ENST00000233468 OTX1P32242 354 aaPredicted RBP9.65□□□□□ -0.86
SF3B6-201ENST00000233468 ALDH3B1P43353 468 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 PDLIM4P50479 330 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 ERVS71-1P61550 626 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 SLC34A1Q06495 639 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 DBPQ10586 325 aaPredicted RBP9.65□□□□□ -0.86
SF3B6-201ENST00000233468 FBXW12Q6X9E4 464 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 COLCA1Q6ZS62 124 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 LRP11Q86VZ4 500 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 GALNT4Q8N4A0 578 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 OR52H1Q8NGJ2 320 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 HAVCR1Q96D42 359 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 CMBLQ96DG6 245 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF582Q96NG8 517 aaPredicted RBP9.65□□□□□ -0.86
SF3B6-201ENST00000233468 EGLN1Q9GZT9 426 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 VCX3BQ9H321 246 aa9.65□□□□□ -0.86
SF3B6-201ENST00000233468 DECR2Q9NUI1 292 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms