RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ETFBKMTQ8IXQ9 262 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 C17orf47Q8NEP4 570 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 MSI2Q96DH6 328 aaKnown RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 ARSGQ96EG1 525 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 LYRM4Q9HD34 91 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 LRP5LA4QPB2 252 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 SSSCA1O60232 199 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 GSTP1P09211 210 aaKnown RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 C1orf140Q5VVS0 124 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 OR4F5Q8NH21 305 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 OR4F4Q96R69 305 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 PCDHGA9Q9Y5G4 932 aaKnown RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 hCG_1809904A0A1W2PP81 198 aa12.52□□□□□ -0.4
HCFC2-201ENST00000229330 A0A1W2PR64 198 aa12.52□□□□□ -0.4
HCFC2-201ENST00000229330 A0A1W2PRV1 198 aa12.52□□□□□ -0.4
HCFC2-201ENST00000229330 HSD17B6O14756 317 aa12.52□□□□□ -0.4
HCFC2-201ENST00000229330 XRCC2O43543 280 aa12.52□□□□□ -0.4
HCFC2-201ENST00000229330 Q6ZSR6 202 aa12.52□□□□□ -0.4
HCFC2-201ENST00000229330 LCORQ96JN0 433 aaPredicted RBP12.52□□□□□ -0.4
HCFC2-201ENST00000229330 PRRX2Q99811 253 aa12.52□□□□□ -0.4
HCFC2-201ENST00000229330 SLCO1C1Q9NYB5 712 aa12.52□□□□□ -0.4
HCFC2-201ENST00000229330 CCDC187A0A096LP49 1063 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 SERTM1A2A2V5 107 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 SLC2A1P11166 492 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 FABP6P51161 128 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 PPIAP62937 165 aaKnown RBP12.52□□□□□ -0.41
HCFC2-201ENST00000229330 CLEC12BQ2HXU8 276 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 METRNLQ641Q3 311 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 OR8G2PQ6IF36 304 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 BTNL8Q6UX41 500 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 RSPO2Q6UXX9 243 aaPredicted RBP12.52□□□□□ -0.41
HCFC2-201ENST00000229330 ARRDC1Q8N5I2 433 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 ARIH2OSQ8N7S6 290 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 LHX4Q969G2 390 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 SIGLEC11Q96RL6 698 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 LMAN1LQ9HAT1 526 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 RAB18Q9NP72 206 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 MED16Q9Y2X0 877 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 ELOA3CA0A087WX78 387 aaPredicted RBP12.52□□□□□ -0.41
HCFC2-201ENST00000229330 C9orf170A2RU37 121 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 G3V3Q6 166 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 HMGA1P17096 107 aaKnown RBP12.52□□□□□ -0.41
HCFC2-201ENST00000229330 PCBD1P61457 104 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 YBX1P67809 324 aaKnown RBP12.52□□□□□ -0.41
HCFC2-201ENST00000229330 ZNF90Q03938 601 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 SPPL3Q8TCT6 385 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 GPX8Q8TED1 209 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 HGDQ93099 445 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 FAM103A1Q9BTL3 118 aaKnown RBP12.52□□□□□ -0.41
HCFC2-201ENST00000229330 PARD6AQ9NPB6 346 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 DAPP1Q9UN19 280 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 SLC5A6Q9Y289 635 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 SDK1Q7Z5N4 2213 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 LAMB2P55268 1798 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 LANCL1O43813 399 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 IL2RGP31785 369 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 PCBP3P57721 371 aaKnown RBP12.52□□□□□ -0.41
HCFC2-201ENST00000229330 AWAT1Q58HT5 328 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 OR51E1Q8TCB6 317 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 R4GMQ9 66 aa12.52□□□□□ -0.41
HCFC2-201ENST00000229330 LAMTOR5O43504 91 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 NOVA1P51513 510 aaKnown RBP12.51□□□□□ -0.41
HCFC2-201ENST00000229330 SCAND1P57086 179 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 GRB2P62993 217 aaKnown RBP12.51□□□□□ -0.41
HCFC2-201ENST00000229330 ANKRD33Q7Z3H0 272 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 THNSL2Q86YJ6 484 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 OR8U1Q8NH10 309 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 TCTN2Q96GX1 697 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 PIGLQ9Y2B2 252 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 FER1L6Q2WGJ9 1857 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 ARID1BQ8NFD5 2236 aaPredicted RBP12.51□□□□□ -0.41
HCFC2-201ENST00000229330 P04436 131 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 HTR5AP47898 357 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 DUSP3P51452 185 aaPredicted RBP12.51□□□□□ -0.41
HCFC2-201ENST00000229330 RPL18Q07020 188 aaKnown RBP12.51□□□□□ -0.41
HCFC2-201ENST00000229330 IL10RAQ13651 578 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 C21orf62-AS1Q17RA5 79 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 INTS12Q96CB8 462 aaKnown RBP12.51□□□□□ -0.41
HCFC2-201ENST00000229330 TRMT61AQ96FX7 289 aaKnown RBP12.51□□□□□ -0.41
HCFC2-201ENST00000229330 B4GALT7Q9UBV7 327 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 PRAMEF26H0Y7S4 382 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 HSPB6O14558 160 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 CD22P20273 847 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 KLF9Q13886 244 aaPredicted RBP12.51□□□□□ -0.41
HCFC2-201ENST00000229330 TMEM268Q5VZI3 342 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 ZNF66Q6ZN08 573 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 ZNF383Q8NA42 475 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 C22orf15Q8WYQ4 148 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 NUDT9Q9BW91 350 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 ADGRL4Q9HBW9 690 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 CTAG2O75638 210 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 NMBP08949 121 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 CLDN17P56750 224 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 MISPQ8IVT2 679 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 CLDN34H7C241 214 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 TUSC2O75896 110 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 CD79AP11912 226 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 ACKR1Q16570 336 aa12.51□□□□□ -0.41
HCFC2-201ENST00000229330 ISOC2Q96AB3 205 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms