RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 SUMO3P55854 103 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 ZNF121P58317 390 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 C19orf57Q0VDD7 668 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 SLC25A45Q8N413 288 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 OR4D6Q8NGJ1 314 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 ZNF285Q96NJ3 590 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 GAREM1Q9H706 876 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 ZNF275Q9NSD4 429 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 WIF1Q9Y5W5 379 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 UNC80Q8N2C7 3258 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 A0A0D9SG52 128 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 PI3P19957 117 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 CCNOP22674 350 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 GABRA4P48169 554 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 SLC35A1P78382 337 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 DHRS2Q13268 280 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 SIGIRRQ6IA17 410 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 TMEM185AQ8NFB2 350 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 OR14L1PQ8NHC6 308 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 PRRG4Q9BZD6 226 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 MYOTQ9UBF9 498 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 MEMO1Q9Y316 297 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 RALGAPA1Q6GYQ0 2036 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 IGHV3-15A0A0B4J1V0 119 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 LGALS8O00214 317 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 CXCL2P19875 107 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 BLVRBP30043 206 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 GPR85P60893 370 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 SSBP1Q04837 148 aaKnown RBP13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 RIPPLY1Q0D2K3 151 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 SCRN3Q0VDG4 424 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 LPAL2Q16609 132 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 FAM74A1Q5RGS3 127 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 ZNF684Q5T5D7 378 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 UNQ6126/PRO20091Q6UXV3 157 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 EXD3Q8N9H8 876 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 ZNF519Q8TB69 540 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 CCDC74BQ96LY2 380 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 TREM1Q9NP99 234 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 SLC39A1Q9NY26 324 aa13.35□□□□□ -0.27
UBE2D4-201ENST00000222402 A0A1W2PPC1 479 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 TO15178 435 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 LCATP04180 440 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 INPP5JQ15735 1006 aaPredicted RBP13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 ABCA11PQ4W5N1 156 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 CARFQ8N187 725 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 GPX8Q8TED1 209 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 MESP1Q9BRJ9 268 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 PPA2Q9H2U2 334 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 ACKR4Q9NPB9 350 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 EHFQ9NZC4 300 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 LINC00862A6NCI5 91 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 SERPINA5P05154 406 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 FCGR2AP12318 317 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 AVPR2P30518 371 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 EIF1P41567 113 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 ROM1Q03395 351 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 DCAF12L2Q5VW00 463 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 DEGS2Q6QHC5 323 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 ST8SIA4Q92187 359 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 PIGTQ969N2 578 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 ASF1BQ9NVP2 202 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 MTRF1O75570 445 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 HOXB5P09067 269 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 UBBP0CG47 229 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 RPS27AP62979 156 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 UBA52P62987 128 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 GTPBP8Q8N3Z3 284 aaPredicted RBP13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 OR56B1Q8NGI3 324 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 MARCH1Q8TCQ1 289 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 RAB33BQ9H082 229 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 PRMT8Q9NR22 394 aaPredicted RBP13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 PLEKHJ1Q9NW61 149 aa13.34□□□□□ -0.27
UBE2D4-201ENST00000222402 NSG1A0A0A6YYJ2 146 aa13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 FAM230AA0A1W2PPH8 454 aa13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 LIPT2A6NK58 231 aa13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 IFNA21P01568 189 aa13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 CLPSP04118 112 aa13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 CLDN6P56747 220 aa13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 TAS2R31P59538 309 aa13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 PXDC1Q5TGL8 231 aa13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 PPP1R1CQ8WVI7 109 aa13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 SPACA9Q96E40 222 aaPredicted RBP13.33□□□□□ -0.27
UBE2D4-201ENST00000222402 A0A0A6YYH2 397 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 A6NJ64 397 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 P04436 131 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 CHRM2P08172 466 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 MOGAT2Q3SYC2 334 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 CLEC1AQ8NC01 280 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 NOXO1Q8NFA2 376 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 SLC25A43Q8WUT9 341 aaPredicted RBP13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 TOMM40LQ969M1 308 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 SPTSSAQ969W0 71 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 GDF15Q99988 308 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 STMND1H3BQB6 276 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 SWI5Q1ZZU3 235 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
UBE2D4-201ENST00000222402 AGBL5Q8NDL9 886 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms