RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SHISA6Q6ZSJ9 500 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 RTN4RL2Q86UN3 420 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 TMEM17Q86X19 198 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 ZNF441Q8N8Z8 693 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 ZDHHC22Q8N966 263 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 THAP6Q8TBB0 222 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 ADAT3Q96EY9 351 aaPredicted RBP15.38■□□□□ 0.05
USB1-201ENST00000219281 KCNK17Q96T54 332 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 VN1R1Q9GZP7 353 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 IFT46Q9NQC8 304 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 FAM206AQ9NX38 181 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 MRPS17Q9Y2R5 130 aaKnown RBP15.38■□□□□ 0.05
USB1-201ENST00000219281 SEC16AO15027 2179 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 OR2AT4A6NND4 320 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 RHPN2P1A8MT19 583 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 EEF1E1-BLOC1S5C9J1V9 151 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 WDPCPO95876 746 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 ERCC1P07992 297 aaPredicted RBP15.38■□□□□ 0.05
USB1-201ENST00000219281 VSIG8P0DPA2 414 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 HLA-GP17693 338 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 CASRP41180 1078 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 PRKXP51817 358 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 OR1M1Q8NGA1 313 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 MVB12AQ96EY5 273 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 NARS2Q96I59 477 aaKnown RBP15.38■□□□□ 0.05
USB1-201ENST00000219281 GAREM1Q9H706 876 aa15.38■□□□□ 0.05
USB1-201ENST00000219281 ASXL3Q9C0F0 2248 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 TMEM265A0A087WTH1 108 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 IGHV3-20A0A0C4DH32 117 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 F5H0A9 414 aaPredicted RBP15.37■□□□□ 0.05
USB1-201ENST00000219281 SULT2B1O00204 365 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 ADAM10O14672 748 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 TTRP02766 147 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 GP1BAP07359 652 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 BCKDHBP21953 392 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 MPZP25189 248 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 HSD11B1P28845 292 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 DAP3P51398 398 aaKnown RBP15.37■□□□□ 0.05
USB1-201ENST00000219281 OR1D5P58170 312 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 PPIAP62937 165 aaKnown RBP15.37■□□□□ 0.05
USB1-201ENST00000219281 QRFPP83859 136 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 SNTB1Q13884 538 aaKnown RBP15.37■□□□□ 0.05
USB1-201ENST00000219281 PTCRAQ6ISU1 281 aaPredicted RBP15.37■□□□□ 0.05
USB1-201ENST00000219281 DEGS2Q6QHC5 323 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 UNQ6126/PRO20091Q6UXV3 157 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 H1FNTQ75WM6 255 aaPredicted RBP15.37■□□□□ 0.05
USB1-201ENST00000219281 RNF133Q8WVZ7 376 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 MBD2Q9UBB5 411 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 FAM74A7A6NL05 159 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 SYT7O43581 403 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 PMP2P02689 132 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 MMP16P51512 607 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 HNRNPKP61978 463 aaKnown RBP eCLIP15.37■□□□□ 0.05
USB1-201ENST00000219281 HSD11B2P80365 405 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 ZP4Q12836 540 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 FAM74A3Q4VXF1 159 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 PAN3Q58A45 887 aaKnown RBP15.37■□□□□ 0.05
USB1-201ENST00000219281 C5orf46Q6UWT4 87 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 SLC22A24Q8N4F4 322 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 INO80EQ8NBZ0 244 aaPredicted RBP15.37■□□□□ 0.05
USB1-201ENST00000219281 TMEM234Q8WY98 164 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 HLA-CQ95604 372 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 SLAMF6Q96DU3 332 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 PHYHIPLQ96FC7 376 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 EMC6Q9BV81 110 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 SELENOIQ9C0D9 397 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 PBOV1Q9GZY1 135 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 PCED1AQ9H1Q7 454 aa15.37■□□□□ 0.05
USB1-201ENST00000219281 DUSP15Q9H1R2 295 aaPredicted RBP15.37■□□□□ 0.05
USB1-201ENST00000219281 EFSO43281 561 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 BPNT1O95861 308 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 FOLR1P15328 257 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 HSF1Q00613 529 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 TLE3Q04726 772 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 KLHL24Q6TFL4 600 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 OR13C9Q8NGT0 318 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 C11orf40Q8WZ69 217 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 FN3KRPQ9HA64 309 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 ATXN7L1Q9ULK2 861 aaPredicted RBP15.36■□□□□ 0.05
USB1-201ENST00000219281 VDAC3Q9Y277 283 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 KCNK7Q9Y2U2 307 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 CABIN1Q9Y6J0 2220 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 C13orf42A0A1B0GVH6 325 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 OR6C76A6NM76 312 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 IFNA6P05013 189 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 INPP5JQ15735 1006 aaPredicted RBP15.36■□□□□ 0.05
USB1-201ENST00000219281 C14orf28Q4W4Y0 310 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 RNF144BQ7Z419 303 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 OR10H5Q8NGA6 315 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 THAP3Q8WTV1 239 aaPredicted RBP15.36■□□□□ 0.05
USB1-201ENST00000219281 C5orf34Q96MH7 638 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 WNT16Q9UBV4 365 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 SUSD2Q9UGT4 822 aa15.36■□□□□ 0.05
USB1-201ENST00000219281 C5orf51A6NDU8 294 aa15.35■□□□□ 0.05
USB1-201ENST00000219281 SSX5O60225 188 aa15.35■□□□□ 0.05
USB1-201ENST00000219281 PIAS2O75928 621 aa15.35■□□□□ 0.05
USB1-201ENST00000219281 CLDN6P56747 220 aa15.35■□□□□ 0.05
USB1-201ENST00000219281 FBXW4P57775 412 aa15.35■□□□□ 0.05
USB1-201ENST00000219281 CFHR1Q03591 330 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms