RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 GDNFP39905 211 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 PTH2RP49190 550 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 SRP9P49458 86 aaKnown RBP15.31■□□□□ 0.04
VRK1-201ENST00000216639 TAS2R20P59543 309 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 SCRN3Q0VDG4 424 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 ECH1Q13011 328 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 CCDC92Q53HC0 331 aaPredicted RBP15.31■□□□□ 0.04
VRK1-201ENST00000216639 C1orf100Q5SVJ3 147 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 PGAP1Q75T13 922 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 CHMP1BQ7LBR1 199 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.31■□□□□ 0.04
VRK1-201ENST00000216639 SIAH3Q8IW03 269 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 OR1M1Q8NGA1 313 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 OR51A2Q8NGJ7 313 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 ALKBH3Q96Q83 286 aaPredicted RBP15.31■□□□□ 0.04
VRK1-201ENST00000216639 MARVELD1Q9BSK0 173 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 DPAGT1Q9H3H5 408 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 GPR84Q9NQS5 396 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 CACNA1HO95180 2353 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 OTOGLQ3ZCN5 2332 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 OR6C65A6NJZ3 312 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 F5H5K5 113 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 TRAPPC2P0DI81 140 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 TRAPPC2BP0DI82 140 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 NTF4P34130 210 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 SLC6A9P48067 706 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 EIF2B2P49770 351 aaKnown RBP15.31■□□□□ 0.04
VRK1-201ENST00000216639 PCBD1P61457 104 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 RAB35Q15286 201 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 SLC25A28Q96A46 364 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 ZNF837Q96EG3 531 aaPredicted RBP15.31■□□□□ 0.04
VRK1-201ENST00000216639 ADAT3Q96EY9 351 aaPredicted RBP15.31■□□□□ 0.04
VRK1-201ENST00000216639 FOXB1Q99853 325 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 LDAHQ9H6V9 325 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 GPR35Q9HC97 309 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 COPZ2Q9P299 210 aa15.31■□□□□ 0.04
VRK1-201ENST00000216639 CGGBP1Q9UFW8 167 aaPredicted RBP15.31■□□□□ 0.04
VRK1-201ENST00000216639 SGCEO43556 437 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 CTAG2O75638 210 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 CCNKO75909 580 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 CCL11P51671 97 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 CD300CQ08708 224 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 CEACAM16Q2WEN9 425 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 ZNF813Q6ZN06 617 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 ADGRE4PQ86SQ3 457 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 SLC22A24Q8N4F4 322 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 CCDC54Q8NEL0 328 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 FBXO17Q96EF6 278 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 UQCC2Q9BRT2 126 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 LRFN3Q9BTN0 628 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 LINC00470Q9BZP3 86 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 EXO5Q9H790 373 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 AUNIPQ9H7T9 357 aa15.3■□□□□ 0.04
VRK1-201ENST00000216639 A0A0U1RQV5 110 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 TMEM272A0A1B0GTI8 110 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 GGT3PA6NGU5 568 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 M0R135 149 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 FARS2O95363 451 aaKnown RBP15.29■□□□□ 0.04
VRK1-201ENST00000216639 OTX1P32242 354 aaPredicted RBP15.29■□□□□ 0.04
VRK1-201ENST00000216639 SNTB2Q13425 540 aaKnown RBP15.29■□□□□ 0.04
VRK1-201ENST00000216639 KLF9Q13886 244 aaPredicted RBP15.29■□□□□ 0.04
VRK1-201ENST00000216639 RNPS1Q15287 305 aaKnown RBP15.29■□□□□ 0.04
VRK1-201ENST00000216639 NRN1LQ496H8 165 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 OR52I2Q8NH67 350 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 PTX4Q96A99 478 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 ZNF799Q96GE5 643 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 FAM71F1Q96KD3 344 aaPredicted RBP15.29■□□□□ 0.04
VRK1-201ENST00000216639 ATG5Q9H1Y0 275 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 SLCO5A1Q9H2Y9 848 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 RNF122Q9H9V4 155 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 NAP1L6A6NFF2 107 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 HMX3A6NHT5 357 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 ZNF724A8MTY0 619 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 INMT-MINDY4F8WBC2 141 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 TMIGD3P0DMS9 266 aaPredicted RBP15.29■□□□□ 0.04
VRK1-201ENST00000216639 B4GALT1P15291 398 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 TNFSF10P50591 281 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 STK11Q15831 433 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 TATDN3Q17R31 274 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 GFOD2Q3B7J2 385 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 PLA1AQ53H76 456 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 ZNF529Q6P280 563 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 GLCCI1Q86VQ1 547 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 MCEMP1Q8IX19 187 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 OR13C9Q8NGT0 318 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 UBASH3BQ8TF42 649 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 UPRTQ96BW1 309 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 METTL17Q9H7H0 456 aaPredicted RBP15.29■□□□□ 0.04
VRK1-201ENST00000216639 ZNF319Q9P2F9 582 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 RBMX2Q9Y388 322 aaKnown RBP15.29■□□□□ 0.04
VRK1-201ENST00000216639 TIMM10BQ9Y5J6 103 aa15.29■□□□□ 0.04
VRK1-201ENST00000216639 PHF3Q92576 2039 aaKnown RBP15.28■□□□□ 0.04
VRK1-201ENST00000216639 CFAP54Q96N23 3096 aa15.28■□□□□ 0.04
VRK1-201ENST00000216639 A0A0A6YYH2 397 aa15.28■□□□□ 0.04
VRK1-201ENST00000216639 A6NJ64 397 aa15.28■□□□□ 0.04
VRK1-201ENST00000216639 ZNF891A8MT65 544 aaPredicted RBP15.28■□□□□ 0.04
VRK1-201ENST00000216639 GABRA1P14867 456 aa15.28■□□□□ 0.04
VRK1-201ENST00000216639 HLA-DMAP28067 261 aa15.28■□□□□ 0.04
VRK1-201ENST00000216639 EFNB2P52799 333 aa15.28■□□□□ 0.04
VRK1-201ENST00000216639 BTG1P62324 171 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms