RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ROM1Q03395 351 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 C3orf33Q6P1S2 294 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 KCTD9Q7L273 389 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CLEC1AQ8NC01 280 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CHST4Q8NCG5 386 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 MFSD8Q8NHS3 518 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 ST7LQ8TDW4 575 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 ST8SIA1Q92185 356 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 FGGYQ96C11 551 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 LRRC46Q96FV0 321 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CDX2Q99626 313 aaPredicted RBP11.69□□□□□ -0.54
CTNS-201ENST00000046640 TAS2R8Q9NYW2 309 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 POLR1DQ9Y2S0 133 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 ADAMTS9Q9P2N4 1935 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 LOC100289279A0A1B0GTE1 492 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 TUBAL3A6NHL2 446 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 LIPT2A6NK58 231 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 ZFAND5O76080 213 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 FOSL2P15408 326 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 HTR2CP28335 458 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 TMEM176BQ3YBM2 270 aaPredicted RBP11.68□□□□□ -0.54
CTNS-201ENST00000046640 LY6G6FQ5SQ64 297 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 OR52W1Q6IF63 320 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 OVCH2Q7RTZ1 564 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 COMMD2Q86X83 199 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 BPIFB2Q8N4F0 458 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 GVQW1Q8N7I0 195 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 OR10H5Q8NGA6 315 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 OR10Z1Q8NGY1 313 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 POC1BQ8TC44 478 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 C15orf40Q8WUR7 153 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 SEH1LQ96EE3 360 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 UTP23Q9BRU9 249 aaKnown RBP11.68□□□□□ -0.54
CTNS-201ENST00000046640 SOX7Q9BT81 388 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 MRI1Q9BV20 369 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 SMOC1Q9H4F8 434 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 A0A1B0GTQ1 180 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 OR5H14A6NHG9 310 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 SLC17A2O00624 439 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 HLA-AP01891 365 aaKnown RBP11.68□□□□□ -0.54
CTNS-201ENST00000046640 ANOS1P23352 680 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 MPGP29372 298 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 DAP3P51398 398 aaKnown RBP11.68□□□□□ -0.54
CTNS-201ENST00000046640 RNF144BQ7Z419 303 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 TMEM185AQ8NFB2 350 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 NUBPLQ8TB37 319 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 RASL10BQ96S79 203 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 VRK1Q99986 396 aaPredicted RBP11.68□□□□□ -0.54
CTNS-201ENST00000046640 DUSP23Q9BVJ7 150 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 IFT46Q9NQC8 304 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 G6PC2Q9NQR9 355 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 KLHL13Q9P2N7 655 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 HHLA2Q9UM44 414 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 R4GMQ9 66 aa11.68□□□□□ -0.54
CTNS-201ENST00000046640 NCOR1O75376 2440 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 A0A1W2PPC1 479 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 EEF1E1-BLOC1S5C9J1V9 151 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 CYB5AP00167 134 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 HPP00738 406 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 AVPR2P30518 371 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 PTGDSP41222 190 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 PLPPR5Q32ZL2 321 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 CDNFQ49AH0 187 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 GLT8D1Q68CQ7 371 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 RTN4RL2Q86UN3 420 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 MISPQ8IVT2 679 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 OR5L2Q8NGL0 311 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 IFI44Q8TCB0 444 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 ZNF775Q96BV0 537 aaPredicted RBP11.67□□□□□ -0.54
CTNS-201ENST00000046640 SLC6A7Q99884 636 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 ADAT1Q9BUB4 502 aaKnown RBP11.67□□□□□ -0.54
CTNS-201ENST00000046640 SAV1Q9H4B6 383 aaPredicted RBP11.67□□□□□ -0.54
CTNS-201ENST00000046640 PTGES2Q9H7Z7 377 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 B3GAT1Q9P2W7 334 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 GPR179Q6PRD1 2367 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 IGHV3-15A0A0B4J1V0 119 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 NDUFA2O43678 99 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 VAMP1P23763 118 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 CD34P28906 385 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 ATP1B3P54709 279 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 CLRN1P58418 232 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 MC2RQ01718 297 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 DHRS2Q13268 280 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 TMEM88Q6PEY1 159 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 TFAP2EQ6VUC0 442 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 BPIFCQ8NFQ6 507 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 OR4D6Q8NGJ1 314 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 SLAMF6Q96DU3 332 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 CYYR1Q96J86 154 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 GNRHR2Q96P88 292 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 SDHAF3Q9NRP4 125 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 WIF1Q9Y5W5 379 aa11.67□□□□□ -0.54
CTNS-201ENST00000046640 URB1O60287 2271 aaKnown RBP11.66□□□□□ -0.54
CTNS-201ENST00000046640 C13orf42A0A1B0GVH6 325 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 A6NIZ1 184 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 RFPL4AA6NLU0 287 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 ZNF736B4DX44 427 aaPredicted RBP11.66□□□□□ -0.54
CTNS-201ENST00000046640 RFPL4AL1F8VTS6 287 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms