RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 FRG2CA6NGY1 282 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 TMEM229AB2RXF0 380 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 ADRB1P08588 477 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 OMGP23515 440 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 MSX1P28360 303 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 ISXQ2M1V0 245 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 SMUG1Q53HV7 270 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 NHLRC1Q6VVB1 395 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 OR51A2Q8NGJ7 313 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 LRP12Q9Y561 859 aa10.81□□□□□ -0.68
CHPF2-201ENST00000035307 ZFYVE26Q68DK2 2539 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 WNK2Q9Y3S1 2297 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 TRAV8-7A0A075B6U6 113 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 H3BMH7 237 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 RER1O15258 196 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 PLPP2O43688 288 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 PRAF2O60831 178 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 MFAP5Q13361 173 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 CLPPQ16740 277 aaPredicted RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 ST3GAL2Q16842 350 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 EXOSC6Q5RKV6 272 aaKnown RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 TRILQ7L0X0 811 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 FAM109AQ8N4B1 249 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 ZNF721Q8TF20 911 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 SPTSSAQ969W0 71 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 PAPOLGQ9BWT3 736 aaKnown RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 HRH4Q9H3N8 390 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 GPR173Q9NS66 373 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 OR5V1Q9UGF6 321 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 TCFL5Q9UL49 500 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 KCNIP3Q9Y2W7 256 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 LSM2Q9Y333 95 aaKnown RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 UBE2J1Q9Y385 318 aaPredicted RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 TNFSF11O14788 317 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 ANGPTL7O43827 346 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 FADS1O60427 444 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 ACAA2P42765 397 aaKnown RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 LUMP51884 338 aaPredicted RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 FAM76BQ5HYJ3 339 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 PLCXD3Q63HM9 321 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 NPEPL1Q8NDH3 523 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 OR11G2Q8NGC1 345 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 HES7Q9BYE0 225 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 CHST11Q9NPF2 352 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 FBXO9Q9UK97 447 aaPredicted RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 EIF4E2O60573 245 aaKnown RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 ZNF205O95201 554 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 NANOS3P60323 173 aaKnown RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 MGAT2Q10469 447 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 FUT7Q11130 342 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 PHLDA2Q53GA4 152 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 STPG1Q5TH74 334 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 BRICD5Q6PL45 260 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 SUMF1Q8NBK3 374 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 OR5M9Q8NGP3 310 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 FBLIM1Q8WUP2 373 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 MED18Q9BUE0 208 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 RTN4RQ9BZR6 473 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 TXNIPQ9H3M7 391 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 MRM2Q9UI43 246 aaKnown RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 NXT1Q9UKK6 140 aaKnown RBP10.8□□□□□ -0.68
CHPF2-201ENST00000035307 KLHDC2Q9Y2U9 406 aa10.8□□□□□ -0.68
CHPF2-201ENST00000035307 PTPRQQ9UMZ3 2332 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 GPR171O14626 319 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 ZNF780AO75290 641 aaPredicted RBP10.79□□□□□ -0.68
CHPF2-201ENST00000035307 RECKO95980 971 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 C11orf40Q8WZ69 217 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 SCGB3A2Q96PL1 93 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 JAM3Q9BX67 310 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 ISYNA1Q9NPH2 558 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 ZNF71Q9NQZ8 489 aaPredicted RBP10.79□□□□□ -0.68
CHPF2-201ENST00000035307 FOXJ2Q9P0K8 574 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 B4GALT7Q9UBV7 327 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 PRELID1Q9Y255 219 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 H7C417 338 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 LGALS8O00214 317 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 MTRF1O75570 445 aaKnown RBP10.79□□□□□ -0.68
CHPF2-201ENST00000035307 HPXP02790 462 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 ALOX5APP20292 161 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 CX3CR1P49238 355 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 RAP2BP61225 183 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 MYBPHQ13203 477 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 CAMK2BQ13554 666 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 GK2Q14410 553 aaPredicted RBP10.79□□□□□ -0.68
CHPF2-201ENST00000035307 IL11RAQ14626 422 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 ACER2Q5QJU3 275 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 PXKQ7Z7A4 578 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 ADGRE4PQ86SQ3 457 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 OR6M1Q8NGM8 313 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 OR52N5Q8NH56 324 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 CCDC187A0A096LP49 1063 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 NKX2-8O15522 239 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 PNLIPRP2P54317 469 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 TAF9Q16594 264 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 LTC4SQ16873 150 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 MESTQ5EB52 335 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 PDSS1Q5T2R2 415 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 FJX1Q86VR8 437 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 C20orf196Q8IYI0 205 aa10.79□□□□□ -0.68
CHPF2-201ENST00000035307 GCNT2Q8N0V5 402 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms