RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 D3Ertd254eA0A0G2JEM5 796 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 4930563M21RikA0A1L1SUT5 578 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr1039A2ARY0 319 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gm5475D3YV11 175 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 H2-M1F7CXU4 344 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r159K7N701 305 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 NumblO08919 604 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Tbx15O70306 602 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Nme1P15532 152 aaKnown RBP9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Htr5aP30966 357 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Rab3dP35276 219 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 CpeQ00493 476 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Bbs12Q5SUD9 708 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr1222Q7TR02 311 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Fam124bQ8BLQ0 456 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Cdk5rap1Q8BTW8 588 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Chrnb4Q8R493 495 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr979Q8VH10 311 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Cd209aQ91ZX1 238 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Lypd6bQ9D7F2 191 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Lrrc51Q9DAK8 192 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Bbs10Q9DBI2 713 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Sorcs2Q9EPR5 1159 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Zfp961E9Q4R5 444 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 2410141K09RikK7N769 464 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Btg1P62325 171 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr11Q60890 313 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr1148Q7TR35 314 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Mef2cQ8CFN5 474 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r8Q8R2C2 303 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r85Q8VIB8 308 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gng12Q9DAS9 72 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Cdc7Q9Z0H0 564 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Scn1aA2APX8 2009 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r174E9PYW5 313 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r173E9Q8V7 313 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr597L7N224 315 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 mt-Co3P00416 261 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Il7rP16872 459 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Rab4aP56371 218 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Dynlrb1P62627 96 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Adra1aP97718 466 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr1507Q0VEP0 313 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Prrc1Q3UPH1 443 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Mtch1Q791T5 389 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 WtipQ7TQJ8 398 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Fam212bQ80VY2 300 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Plekhf2Q91WB4 249 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Thyn1Q91YJ3 226 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 SlirpQ9D8T7 112 aaKnown RBP9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Siglec1Q62230 1695 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Ighv15-2A0A0A6YX72 118 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Sirpb1bA0A0A6YXN8 397 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gm6096D3YTY6 151 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Sirpb1cK7N6K7 397 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 SncaO55042 140 aaKnown RBP9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 RelP15307 587 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Selenbp1P17563 472 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Tacr3P47937 452 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 IhhP97812 411 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Bhlha9Q5RJB0 231 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Pla2g7Q60963 440 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr598Q7TRR2 319 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Q8C4X7 151 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r208Q8R275 308 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Mic13Q8R404 119 aaKnown RBP9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Rwdd3Q8VIL2 267 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 PigcQ9CXR4 297 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Slc35a2Q9R0M8 390 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 D17h6s53eQ9Z1R4 293 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Nup205A0A0J9YUD5 2061 aaKnown RBP9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Ltn1Q6A009 1767 aa9.03□□□□□ -0.96
Syne1-201ENSMUST00000041639 Ccdc71lE9Q4T4 218 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 4930522L14RikE9QAG4 666 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Prr23a1G3UW32 258 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Dusp1P28563 367 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Itgb2lQ3UV74 738 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gramd2aQ3V3G7 320 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr323Q5NCD0 323 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Ip6k1Q6PD10 433 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Q80UB0 333 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Zfp286Q8C0E6 519 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Endod1Q8C522 501 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Agpat2Q8K3K7 278 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Calhm5Q8R100 309 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 CmblQ8R1G2 245 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr1347Q8VF33 319 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr883Q8VF64 309 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Tm4sf4Q91XD3 202 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Nupr1Q9WTK0 80 aa9.02□□□□□ -0.96
Syne1-201ENSMUST00000041639 Trav10nA0A075B622 114 aa9.02□□□□□ -0.97
Syne1-201ENSMUST00000041639 Trav10A0A075B642 114 aa9.02□□□□□ -0.97
Syne1-201ENSMUST00000041639 Gm13283A0A087WPG5 182 aa9.02□□□□□ -0.97
Syne1-201ENSMUST00000041639 Rhox2bA2A447 191 aa9.02□□□□□ -0.97
Syne1-201ENSMUST00000041639 Socs1O35716 212 aa9.02□□□□□ -0.97
Syne1-201ENSMUST00000041639 Stard6P59096 233 aa9.02□□□□□ -0.97
Syne1-201ENSMUST00000041639 Ifna16Q810G1 189 aa9.02□□□□□ -0.97
Syne1-201ENSMUST00000041639 Vmn1r35Q8R2E2 296 aa9.02□□□□□ -0.97
Syne1-201ENSMUST00000041639 Rhox2fA2ANE0 191 aa9.02□□□□□ -0.97
Syne1-201ENSMUST00000041639 Esp16A8R0U9 85 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 83.8 ms