RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 MT-ND5P03915 603 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 HTR1AP08908 422 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 DBHP09172 617 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 ACSM4P0C7M7 580 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 CCL2P13500 99 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 CCNOP22674 350 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 RGS6P49758 472 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 MMP16P51512 607 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 PRKXP51817 358 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 NR1H2P55055 460 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 UNQ6126/PRO20091Q6UXV3 157 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 FAM220AQ7Z4H9 259 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 NAA40Q86UY6 237 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 C1orf174Q8IYL3 243 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 SPARTQ8N0X7 666 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 SVOPQ8N4V2 548 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 ZNF485Q8NCK3 441 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 SPRYD4Q8WW59 207 aaPredicted RBP10.66□□□□□ -0.7
LINC00339-213ENST00000642137 PLPPR2Q96GM1 343 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 RADILQ96JH8 1075 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 C4orf36Q96KX1 117 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 KCNS3Q9BQ31 491 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 MND1Q9BWT6 205 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 C1QTNF5Q9BXJ0 243 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 ISG20L2Q9H9L3 353 aaKnown RBP10.66□□□□□ -0.7
LINC00339-213ENST00000642137 TBCCD1Q9NVR7 557 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 BABAM2Q9NXR7 383 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 EIF3KQ9UBQ5 218 aaKnown RBP10.66□□□□□ -0.7
LINC00339-213ENST00000642137 KCNN3Q9UGI6 736 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 GNG8Q9UK08 70 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 GRIP1Q9Y3R0 1128 aa10.66□□□□□ -0.7
LINC00339-213ENST00000642137 A0A087WXM4 84 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-213ENST00000642137 TMEM269A0A1B0GVZ9 245 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 MAGEA13PA6NCF6 341 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 DEFB108AA8MXU0 73 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 J3QW42 95 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 SRSF10O75494 262 aaKnown RBP10.65□□□□□ -0.7
LINC00339-213ENST00000642137 CD3EP07766 207 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 TUBG1P23258 451 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 CALCRP30988 508 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 RAD52P43351 418 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 CX3CR1P49238 355 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 GBX2P52951 348 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-213ENST00000642137 CDH15P55291 814 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 UCP2P55851 309 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 WNT4P56705 351 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 EMX1Q04741 257 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-213ENST00000642137 BSPH1Q075Z2 132 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 ACSM1Q08AH1 577 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 ZNF829Q3KNS6 432 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-213ENST00000642137 CCDC58Q4VC31 144 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 OR2G6Q5TZ20 316 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 FDX2Q6P4F2 183 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 ZNF773Q6PK81 442 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 COLCA1Q6ZS62 124 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 PRSS45Q7RTY3 260 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 PAQR4Q8N4S7 273 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-213ENST00000642137 TSPAN14Q8NG11 270 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 GATAD2BQ8WXI9 593 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 RORBQ92753 470 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 APOBEC3DQ96AK3 386 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-213ENST00000642137 PELI1Q96FA3 418 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 PSMG3-AS1Q96PY0 264 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 DOK1Q99704 481 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 TUBG2Q9NRH3 451 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 FAM206AQ9NX38 181 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 SPEF1Q9Y4P9 236 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 R4GMQ9 66 aa10.65□□□□□ -0.7
LINC00339-213ENST00000642137 A1L4Q6 167 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 ABCD4O14678 606 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 RPP14O95059 124 aaKnown RBP10.64□□□□□ -0.71
LINC00339-213ENST00000642137 PNPP00491 289 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 LCATP04180 440 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 PCMT1P22061 227 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 NR4A1P22736 598 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 LOXP28300 417 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-213ENST00000642137 WNT5AP41221 380 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 TGM4P49221 684 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 CCR9P51686 369 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 ZNF121P58317 390 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-213ENST00000642137 PSMA6P60900 246 aaKnown RBP10.64□□□□□ -0.71
LINC00339-213ENST00000642137 HGFACQ04756 655 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 SPHARQ15513 63 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 TBCEQ15813 527 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-213ENST00000642137 ZNF544Q6NX49 715 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 OR5L1Q8NGL2 311 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 RNF166Q96A37 237 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-213ENST00000642137 COG8Q96MW5 612 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 BCL2L14Q9BZR8 327 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 ISYNA1Q9NPH2 558 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 ACOT13Q9NPJ3 140 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 G6PC2Q9NQR9 355 aa10.64□□□□□ -0.71
LINC00339-213ENST00000642137 LSM2Q9Y333 95 aaKnown RBP10.64□□□□□ -0.71
LINC00339-213ENST00000642137 UBR5O95071 2799 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-213ENST00000642137 FAM221AA4D161 298 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 TRIM64CA6NLI5 447 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 LOC110117498-PIK3R3F6TDL0 507 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 OGG1O15527 345 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 SIAH2O43255 324 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms