RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	MAGEA8	P43361	318 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	SLC6A8	P48029	635 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	RPL14	P50914	215 aa	Known RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CCR4	P51679	360 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ABCE1	P61221	599 aa	Known RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CSNK2A1	P68400	391 aa	Predicted RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	HBA1	P69905	142 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ZNF117	Q03924	483 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	BST1	Q10588	318 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	FOXF1	Q12946	379 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	GNA13	Q14344	377 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	HNF4G	Q14541	408 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	P2RY6	Q15077	328 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CD226	Q15762	336 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	EFNB3	Q15768	340 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ACKR1	Q16570	336 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ZNF239	Q16600	458 aa	Known RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	SLC25A53	Q5H9E4	307 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ERICH5	Q6P6B1	374 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	C6orf89	Q6UWU4	347 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	PLXDC2	Q6UX71	529 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CCDC190	Q86UF4	302 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	STH	Q8IWL8	128 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	UBE2J2	Q8N2K1	259 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	KRTCAP2	Q8N6L1	136 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ZFP90	Q8TF47	636 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	TESC	Q96BS2	214 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	MOB3A	Q96BX8	217 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ZHX1-C8orf76	Q96EF9	292 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	GRAMD2B	Q96HH9	432 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	URB1-AS1	Q96HZ7	61 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	C18orf12	Q96KH6	178 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	OR7D2	Q96RA2	312 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	SDF2	Q99470	211 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	MRPL13	Q9BYD1	178 aa	Known RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ACTR6	Q9GZN1	396 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	TMEM185B	Q9H7F4	350 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	UBTD1	Q9HAC8	227 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	SEBOX	Q9HB31	216 aa	Predicted RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	SPACA1	Q9HBV2	294 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	DNAJC4	Q9NNZ3	241 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	KRCC1	Q9NPI7	259 aa	Predicted RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	SLC35A3	Q9Y2D2	325 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	STAB1	Q9NY15	2570 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CAD	P27708	2225 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523		A0A087X0K7	114 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523		A0A0J9YW62	118 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	SERINC4	A6NH21	518 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	TRPC5OS	A6NMA1	111 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ANKRD30BL	A7E2S9	258 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	SLCO1B7	G3V0H7	640 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	XRCC3	O43542	346 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	UQCRB	P14927	111 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	TNFRSF1B	P20333	461 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	UQCRC2	P22695	453 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	FCGR2B	P31994	310 aa	Predicted RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	S100A3	P33764	101 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CHI3L1	P36222	383 aa	Predicted RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CBX1	P83916	185 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CHI3L2	Q15782	390 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ZNF141	Q15928	474 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ARHGAP11B	Q3KRB8	267 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	TMEM176B	Q3YBM2	270 aa	Predicted RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	PDLIM3	Q53GG5	364 aa	Predicted RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CARD17	Q5XLA6	110 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	DEGS2	Q6QHC5	323 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	STAC2	Q6ZMT1	411 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	FCRLA	Q7L513	359 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	C6orf120	Q7Z4R8	191 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	OR4A15	Q8NGL6	344 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	OR2AJ1	Q8NGZ0	328 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	OR5AK3P	Q8NH89	298 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	GPR119	Q8TDV5	335 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	HSD17B8	Q92506	261 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	C3orf30	Q96M34	536 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	POTEKP	Q9BYX7	375 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	LAT2	Q9GZY6	243 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	CACYBP	Q9HB71	228 aa	Known RBP	5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	EMC3	Q9P0I2	261 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	ONECUT1	Q9UBC0	465 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	WDR45	Q9Y484	360 aa		5.42	□□□□□ -1.54
CASC19-238	ENST00000641523	IGLV5-39	A0A0G2JS06	123 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	TMEM129	A0AVI4	362 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	ZNF724	A8MTY0	619 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	GPR171	O14626	319 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	KCNAB3	O43448	404 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	KIAA0513	O60268	411 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	NTN1	O95631	604 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	MT-ND1	P03886	318 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	CSN3	P07498	182 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	TROVE2	P10155	538 aa	Known RBP eCLIP	5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	RRAS	P10301	218 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	TUBG1	P23258	451 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	PRDX2	P32119	198 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	APOBEC1	P41238	236 aa	Known RBP	5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	OR3A1	P47881	315 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	STX3	Q13277	289 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	SKP2	Q13309	424 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	MELK	Q14680	651 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	QPRT	Q15274	297 aa		5.41	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms