RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 A8MXK9 166 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 FADS1O60427 444 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 HTR3BO95264 441 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 HSD11B1P28845 292 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 BDKRB2P30411 391 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 SFTPDP35247 375 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 HSD11B2P80365 405 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 CLVS2Q5SYC1 327 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 DNM1P46Q6ZS02 220 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 NAXDQ8IW45 347 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 OR5M8Q8NGP6 311 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 OR6K3Q8NGY3 331 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 LHFPL5Q8TAF8 219 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 ROBO4Q8WZ75 1007 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 MRPS24Q96EL2 167 aaKnown RBP13.03□□□□□ -0.32
SCARB2-221ENST00000640341 G6PC2Q9NQR9 355 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 FGF21Q9NSA1 209 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 OR2T1O43869 369 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 EIF4E2O60573 245 aaKnown RBP13.02□□□□□ -0.32
SCARB2-221ENST00000640341 FGF2P09038 288 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 NPY4RP50391 375 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 ROM1Q03395 351 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 FAM166AQ6J272 317 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 C11orf87Q6NUJ2 197 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 C11orf40Q8WZ69 217 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 SLAMF6Q96DU3 332 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 ELL3Q9HB65 397 aaPredicted RBP13.02□□□□□ -0.32
SCARB2-221ENST00000640341 MMACHCQ9Y4U1 282 aa13.02□□□□□ -0.32
SCARB2-221ENST00000640341 TUBAL3A6NHL2 446 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 MS4A18H0YCH9 400 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 NME1P15531 152 aaKnown RBP13.02□□□□□ -0.33
SCARB2-221ENST00000640341 AGTR1P30556 359 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 LTBRP36941 435 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 HSF1Q00613 529 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 FOXF1Q12946 379 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 IKZF1Q13422 519 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-221ENST00000640341 MS4A18Q3C1V0 323 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 RAB12Q6IQ22 244 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 PTCRAQ6ISU1 281 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-221ENST00000640341 THRSPQ92748 146 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 SLC39A1Q9NY26 324 aa13.02□□□□□ -0.33
SCARB2-221ENST00000640341 A0A0B4J2A0 478 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 FAM74A7A6NL05 159 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 RAB27BO00194 218 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 HPP00738 406 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 HCKP08631 526 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF20P17024 532 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 EMP2P54851 167 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 SCAND1P57086 179 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 FAM74A3Q4VXF1 159 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 TMEM244Q5VVB8 128 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF704Q6ZNC4 412 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-221ENST00000640341 TMPPEQ6ZT21 453 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 NAXEQ8NCW5 288 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 PAQR8Q8TEZ7 354 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 TMEM231Q9H6L2 316 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 LMAN1LQ9HAT1 526 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 VSX1Q9NZR4 365 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-221ENST00000640341 SHPKQ9UHJ6 478 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 MEGF11A6BM72 1044 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 WIPF3A6NGB9 483 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 TMEM127O75204 238 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF735P0CB33 412 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 MGMTP16455 207 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 UNC119Q13432 240 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF273Q14593 569 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 BPIFCQ8NFQ6 507 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 DCUN1D4Q92564 292 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 PHB2Q99623 299 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 SLC5A6Q9Y289 635 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 HRH3Q9Y5N1 445 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 WDFY4Q6ZS81 3184 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 IGKV3D-11A0A0A0MRZ8 115 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 A0A1B0GTQ1 180 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 TRIM77I1YAP6 450 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 VSIG8P0DPA2 414 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 PGAM2P15259 253 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 MFAP5Q13361 173 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 AKIRIN2Q53H80 203 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 OR2W3Q7Z3T1 314 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 TMEM104Q8NE00 496 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 GSKIPQ9P0R6 139 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 KCNK7Q9Y2U2 307 aa13.01□□□□□ -0.33
SCARB2-221ENST00000640341 IGHV1OR15-9A0A0B4J2B8 117 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 SDCBPO00560 298 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF93P35789 620 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 RNF4P78317 190 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 ARFRP1Q13795 201 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 C14orf28Q4W4Y0 310 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 JMJD6Q6NYC1 403 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 DNM1P34Q6PK57 102 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 H1FNTQ75WM6 255 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 ST7LQ8TDW4 575 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 TMEM234Q8WY98 164 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 PRRT1Q99946 306 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 ST6GALNAC5Q9BVH7 336 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 PBOV1Q9GZY1 135 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 DMDP11532 3685 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms