RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 IRF4Q15306 451 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 RGNQ15493 299 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 ANXA8L1Q5VT79 327 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 PLET1Q6UQ28 207 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 SPESP1Q6UW49 350 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 TMEM205Q6UW68 189 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 NPSR1Q6W5P4 371 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 CMC1Q7Z7K0 106 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 TTC29Q8NA56 475 aaPredicted RBP2.08□□□□□ -2.08
CCDC7-216ENST00000640058 OR10AD1Q8NGE0 317 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 TMEM230Q96A57 120 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 MICU1Q9BPX6 476 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 UBIAD1Q9Y5Z9 338 aa2.08□□□□□ -2.08
CCDC7-216ENST00000640058 TRAV25A0A0B4J276 109 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 A0A1B0GW55 424 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 CD160O95971 181 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 IL4P05112 153 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 CD3GP09693 182 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 DUX4L2P0CJ85 424 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 DUX4L3P0CJ86 424 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 DUX4L5P0CJ88 424 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 DUX4L6P0CJ89 424 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 DUX4L7P0CJ90 424 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 EIF2S2P20042 333 aaKnown RBP2.07□□□□□ -2.08
CCDC7-216ENST00000640058 CEACAM3P40198 252 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 UQCRFS1P47985 274 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 ZNF816Q0VGE8 651 aaPredicted RBP2.07□□□□□ -2.08
CCDC7-216ENST00000640058 CDH17Q12864 832 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 IL18Q14116 193 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 AVPI1Q5T686 147 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 C1orf185Q5T7R7 199 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 GPR107Q5VW38 600 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 MBOAT2Q6ZWT7 520 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 EIF3MQ7L2H7 374 aaKnown RBP2.07□□□□□ -2.08
CCDC7-216ENST00000640058 COMMD1Q8N668 190 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 C11orf72Q8NBR9 251 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 OR52E5Q8NH55 327 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 C15orf40Q8WUR7 153 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 TM4SF18Q96CE8 201 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 PRRC1Q96M27 445 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 RNF157Q96PX1 679 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 RNF5Q99942 180 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 BPIFA3Q9BQP9 254 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 ZYG11BQ9C0D3 744 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 ELOVL6Q9H5J4 265 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 TMEM38AQ9H6F2 299 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 RETNQ9HD89 108 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 HMG20AQ9NP66 347 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 CLN6Q9NWW5 311 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 DUX4Q9UBX2 424 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 TBC1D24Q9ULP9 559 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.07□□□□□ -2.08
CCDC7-216ENST00000640058 TSPOAP1O95153 1857 aa2.07□□□□□ -2.08
CCDC7-216ENST00000640058 ZNF850A8MQ14 1090 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 CASQ2O14958 399 aaPredicted RBP2.06□□□□□ -2.08
CCDC7-216ENST00000640058 SOCS1O15524 211 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 FLOT1O75955 427 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 FGFR1OPO95684 399 aaKnown RBP2.06□□□□□ -2.08
CCDC7-216ENST00000640058 OXTP01178 125 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 HBE1P02100 147 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 ASGR1P07306 291 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 CTSLP07711 333 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 GGT1P19440 569 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 RAB4AP20338 218 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 U2AF2P26368 475 aaKnown RBP eCLIP2.06□□□□□ -2.08
CCDC7-216ENST00000640058 TNFSF9P41273 254 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 RPS5P46782 204 aaKnown RBP2.06□□□□□ -2.08
CCDC7-216ENST00000640058 ATP5OP48047 213 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 PPP1CBP62140 327 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 SEMG2Q02383 582 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 NCF4Q15080 339 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 PSMD5Q16401 504 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 FAM78AQ5JUQ0 283 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 SPIN3Q5JUX0 258 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 METTL21CQ5VZV1 264 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 STUMQ69YW2 141 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 APRG1Q8IVJ8 170 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 JAGN1Q8N5M9 183 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 C8orf31Q8N9H6 132 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 NECAP1Q8NC96 275 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 OR56A4Q8NGH8 313 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 OR52E2Q8NGJ4 325 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 EEF1AKMT3Q96AZ1 226 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 CAMK2N2Q96S95 79 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 ZNF382Q96SR6 550 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 CDX2Q99626 313 aaPredicted RBP2.06□□□□□ -2.08
CCDC7-216ENST00000640058 DOK1Q99704 481 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 TEKT3Q9BXF9 490 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 UCK2Q9BZX2 261 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 SLC7A5P2Q9GIP4 190 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 FAM49BQ9NUQ9 324 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 PTTG3PQ9NZH4 202 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 S4R3C0 116 aa2.06□□□□□ -2.08
CCDC7-216ENST00000640058 C2orf16Q68DN1 1984 aa2.05□□□□□ -2.08
CCDC7-216ENST00000640058 C17orf51A8MQB3 221 aa2.05□□□□□ -2.08
CCDC7-216ENST00000640058 H7C0C1 242 aa2.05□□□□□ -2.08
CCDC7-216ENST00000640058 H7C417 338 aa2.05□□□□□ -2.08
CCDC7-216ENST00000640058 DNASE2O00115 360 aaPredicted RBP2.05□□□□□ -2.08
CCDC7-216ENST00000640058 DNAJB6O75190 326 aa2.05□□□□□ -2.08
CCDC7-216ENST00000640058 YIF1AO95070 293 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms