RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 KDM4BO94953 1096 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 TGM6O95932 706 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 HPXP02790 462 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 ALDOBP05062 364 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 CYB561P49447 251 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 VEGFCP49767 419 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 TOMM20Q15388 145 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 FAAP20Q6NZ36 180 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 HDDC2Q7Z4H3 204 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 OR51A2Q8NGJ7 313 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 OR6M1Q8NGM8 313 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 OR6X1Q8NH79 312 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 LILRB4Q8NHJ6 448 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 GRPEL2Q8TAA5 225 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 NKX3-1Q99801 234 aaPredicted RBP13.38□□□□□ -0.27
TRIM3-215ENST00000639856 LRFN3Q9BTN0 628 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 OR10A4Q9H209 315 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 RANBP3Q9H6Z4 567 aaPredicted RBP13.38□□□□□ -0.27
TRIM3-215ENST00000639856 NOX3Q9HBY0 568 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 FAM206AQ9NX38 181 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 TAS2R8Q9NYW2 309 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 TRAV18A0A075B6X5 111 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 A0A1B0GUH1 482 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 A0A1W2PPL8 197 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 PINLYPA6NC86 204 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 LRRC3CA6NJW4 275 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 SSNA1O43805 119 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 RFPL3SP0C7P2 107 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 ITGA3P26006 1051 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 EIF1AXP47813 144 aaKnown RBP13.37□□□□□ -0.27
TRIM3-215ENST00000639856 LINC00303Q3SY05 128 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 METTL11BQ5VVY1 283 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 SPINK14Q6IE38 97 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 OR10S1Q8NGN2 331 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 ZFP64Q9NPA5 681 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 HSPB11Q9Y547 144 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 PTPRBP23467 1997 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 CEP250Q9BV73 2442 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 MEIKINA0A087WXM9 373 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 LOC102725191A0A1B0GVB3 256 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 DCDC2BA2VCK2 349 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 AQP7P3A6NL99 342 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 P2RY10O00398 339 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 ARPC1BO15143 372 aaKnown RBP13.37□□□□□ -0.27
TRIM3-215ENST00000639856 AKR7A2O43488 359 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 ZNF780AO75290 641 aaPredicted RBP13.37□□□□□ -0.27
TRIM3-215ENST00000639856 CBR3O75828 277 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 ACSM4P0C7M7 580 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 ZNF43P17038 809 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 FAUP35544 74 aaKnown RBP13.37□□□□□ -0.27
TRIM3-215ENST00000639856 PCGF3Q3KNV8 242 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 KLHL24Q6TFL4 600 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 LUZP2Q86TE4 346 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
TRIM3-215ENST00000639856 UTP23Q9BRU9 249 aaKnown RBP13.37□□□□□ -0.27
TRIM3-215ENST00000639856 ATG5Q9H1Y0 275 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 PTTG3PQ9NZH4 202 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 CGGBP1Q9UFW8 167 aaPredicted RBP13.37□□□□□ -0.27
TRIM3-215ENST00000639856 LHFPL6Q9Y693 200 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 ASPMQ8IZT6 3477 aa13.37□□□□□ -0.27
TRIM3-215ENST00000639856 A0A1B0GVI7 797 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 LOC390937A0A1W2PQ73 354 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 SULT2B1O00204 365 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 LMX1BO60663 402 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 ICMTO60725 284 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 NDUFB6O95139 128 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 TTRP02766 147 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 CSF1P09603 554 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 CD96P40200 585 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 NBL1P41271 181 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 SNRPD2P62316 118 aaKnown RBP13.36□□□□□ -0.27
TRIM3-215ENST00000639856 SLC35A1P78382 337 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 SPOCK1Q08629 439 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 C1orf100Q5SVJ3 147 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 SLC25A47Q6Q0C1 308 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 CFAP77Q6ZQR2 320 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 ELMOD2Q8IZ81 293 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 C9orf62Q8N4C0 152 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 NKAIN3Q8N8D7 197 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 SEC61A2Q9H9S3 476 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 GABRA1P14867 456 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 PRSS3P35030 304 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 MECP2P51608 486 aaKnown RBP13.36□□□□□ -0.27
TRIM3-215ENST00000639856 MFAP5Q13361 173 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 HIST3H3Q16695 136 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 CCDC92Q53HC0 331 aaPredicted RBP13.36□□□□□ -0.27
TRIM3-215ENST00000639856 TMPPEQ6ZT21 453 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 CREB3L2Q70SY1 520 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 RHOUQ7L0Q8 258 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 YRDCQ86U90 279 aaKnown RBP13.36□□□□□ -0.27
TRIM3-215ENST00000639856 LYPD6Q86Y78 171 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 SIGLEC12Q96PQ1 595 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 PBOV1Q9GZY1 135 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 LRFN1Q9P244 771 aa13.36□□□□□ -0.27
TRIM3-215ENST00000639856 GDF2Q9UK05 429 aaPredicted RBP13.36□□□□□ -0.27
TRIM3-215ENST00000639856 KIAA1549Q9HCM3 1950 aa13.35□□□□□ -0.27
TRIM3-215ENST00000639856 CDRT15L2A8MXV6 281 aa13.35□□□□□ -0.27
TRIM3-215ENST00000639856 ZNF878C9JN71 531 aa13.35□□□□□ -0.27
TRIM3-215ENST00000639856 NEURL1O76050 574 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms