RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SYT3Q9BQG1 590 aa6.71□□□□□ -1.34
PNKP-229ENST00000637897 DCUN1D5Q9BTE7 237 aa6.71□□□□□ -1.34
PNKP-229ENST00000637897 MND1Q9BWT6 205 aa6.71□□□□□ -1.34
PNKP-229ENST00000637897 OR52D1Q9H346 318 aa6.71□□□□□ -1.34
PNKP-229ENST00000637897 FN3KQ9H479 309 aa6.71□□□□□ -1.34
PNKP-229ENST00000637897 TMEM160Q9NX00 188 aa6.71□□□□□ -1.34
PNKP-229ENST00000637897 CHCHD3Q9NX63 227 aaKnown RBP6.71□□□□□ -1.34
PNKP-229ENST00000637897 H2AFY2Q9P0M6 372 aaPredicted RBP6.71□□□□□ -1.34
PNKP-229ENST00000637897 DIMT1Q9UNQ2 313 aaKnown RBP6.71□□□□□ -1.34
PNKP-229ENST00000637897 IGLV3-9A0A075B6K5 115 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 LOC100509620A0A075B734 347 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 LOC390937A0A1W2PQ73 354 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 BLOC1S5-TXNDC5H3BN57 136 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 NDUFS8O00217 210 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 AKAP8O43823 692 aaKnown RBP6.7□□□□□ -1.34
PNKP-229ENST00000637897 LMX1BO60663 402 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 PTHP01270 115 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 CSF3P09919 207 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 FAM157CP0CG43 387 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 SAGP10523 405 aaPredicted RBP6.7□□□□□ -1.34
PNKP-229ENST00000637897 NAT2P11245 290 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 DAOP14920 347 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 SLC6A6P31641 620 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 TGFBR2P37173 567 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 MAGEB1P43366 347 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 MTNR1AP48039 350 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 SLC9A3P48764 834 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 EVX1P49640 407 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 RGS6P49758 472 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 TMED1Q13445 227 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 MED22Q15528 200 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 ARMCX4Q5H9R4 360 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 CLEC12AQ5QGZ9 265 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 NXNL2Q5VZ03 156 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 OTPQ5XKR4 325 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 CYB5R2Q6BCY4 276 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 FOXL2NBQ6ZUU3 175 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 OAFQ86UD1 273 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 IGFN1Q86VF2 1251 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 ZNF101Q8IZC7 436 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 LNX2Q8N448 690 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 NANOGP1Q8N7R0 232 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 NOXO1Q8NFA2 376 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 PROKR2Q8NFJ6 384 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 OR52I1Q8NGK6 324 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 OR4Q3Q8NH05 313 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 SPATA3Q8NHX4 192 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 ZNF519Q8TB69 540 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 SGTBQ96EQ0 304 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 SAMD8Q96LT4 415 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 MGLLQ99685 303 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 FGF20Q9NP95 211 aaPredicted RBP6.7□□□□□ -1.34
PNKP-229ENST00000637897 ZNF346Q9UL40 294 aaKnown RBP6.7□□□□□ -1.34
PNKP-229ENST00000637897 SIGLEC7Q9Y286 467 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 HIF3AQ9Y2N7 669 aa6.7□□□□□ -1.34
PNKP-229ENST00000637897 EXOSC1Q9Y3B2 195 aaKnown RBP6.7□□□□□ -1.34
PNKP-229ENST00000637897 TRAV27A0A087WT01 109 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 RIIAD1A6NNX1 92 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 FAM157AC9JC47 383 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 CCRL2O00421 344 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 BHLHE40O14503 412 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 MYL12BO14950 172 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 PHF1O43189 567 aaPredicted RBP6.69□□□□□ -1.34
PNKP-229ENST00000637897 AIREO43918 545 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 PTP4A3O75365 173 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 CLPXO76031 633 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 UBL3O95164 117 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 IFNGP01579 166 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 IGHMP01871 453 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 FAM157BP0CG42 384 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 OR8G3PP0DMU2 310 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 ZNF250P15622 560 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 ZNF182P17025 639 aaPredicted RBP6.69□□□□□ -1.34
PNKP-229ENST00000637897 PAICSP22234 425 aaKnown RBP6.69□□□□□ -1.34
PNKP-229ENST00000637897 APEX1P27695 318 aaKnown RBP6.69□□□□□ -1.34
PNKP-229ENST00000637897 HTR1FP30939 366 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 LIPAP38571 399 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 ENDOGQ14249 297 aaKnown RBP6.69□□□□□ -1.34
PNKP-229ENST00000637897 SPCS2Q15005 226 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 SPHARQ15513 63 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 DGUOKQ16854 277 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 ALKBH6Q3KRA9 238 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 CHRFAM7AQ494W8 412 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 ANKDD1AQ495B1 522 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 FAM120AOSQ5T036 256 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 AADACL4Q5VUY2 407 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 GDPGP1Q6ZNW5 385 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 C1orf229Q6ZS94 237 aaPredicted RBP6.69□□□□□ -1.34
PNKP-229ENST00000637897 FAM122BQ7Z309 247 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 NANOGNBQ7Z5D8 188 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 LRRC18Q8N456 261 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 IL17RDQ8NFM7 739 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 OR9Q1Q8NGQ5 310 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 OR13C2Q8NGS9 318 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 UBASH3BQ8TF42 649 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 LGALS12Q96DT0 336 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 RNFT2Q96EX2 444 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 POM121L2Q96KW2 1035 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 PIMREGQ9BSJ6 248 aa6.69□□□□□ -1.34
PNKP-229ENST00000637897 IFT27Q9BW83 186 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms