RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SOX7Q9BT81 388 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 WDR76Q9H967 626 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 FOXJ2Q9P0K8 574 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 NCDNQ9UBB6 729 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 TCFL5Q9UL49 500 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 KLHDC2Q9Y2U9 406 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 CHCHD2Q9Y6H1 151 aaPredicted RBP10.29□□□□□ -0.76
CLN6-217ENST00000636964 PCNX2A6NKB5 2137 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 MARCH11A6NNE9 402 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 C9orf172C9J069 976 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 DKK1O94907 266 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 MT-ATP6P00846 226 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 HLA-DQA2P01906 255 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 PITPNBP48739 271 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 GGTLC2Q14390 218 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 PABPC1L2AQ5JQF8 200 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 EXD3Q8N9H8 876 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 WDSUB1Q8N9V3 476 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 GHSRQ92847 366 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 PCDHB10Q9UN67 800 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 COL27A1Q8IZC6 1860 aaPredicted RBP10.29□□□□□ -0.76
CLN6-217ENST00000636964 A0A087WV48 116 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 A0A0G2JK05 382 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 TMEM82A0PJX8 343 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 J3KRW8 73 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 L7N2F9 121 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 SSNA1O43805 119 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 DXOO77932 396 aaKnown RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 RPP14O95059 124 aaKnown RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 AKR7A3O95154 331 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 TXNDC12O95881 172 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 RENP00797 406 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 H2AFB2P0C5Z0 115 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 CCL3P10147 92 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 GAAP10253 952 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 SHC1P29353 583 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 SMCO1Q147U7 214 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 EXT1Q16394 746 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 OR2B11Q5JQS5 317 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 SLC35D3Q5M8T2 416 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 ACER2Q5QJU3 275 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 ZNF468Q5VIY5 522 aaPredicted RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 B3GNTL1Q67FW5 361 aaPredicted RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 ESPNLQ6ZVH7 1005 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 TMEM156Q8N614 296 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 CPEB3Q8NE35 698 aaKnown RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 OR6N2Q8NGY6 317 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 STK35Q8TDR2 534 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 CPNE4Q96A23 557 aaPredicted RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 MEGF10Q96KG7 1140 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 TSPAN10Q9H1Z9 355 aaPredicted RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 TREM1Q9NP99 234 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 FTCDNL1E5RQL4 147 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 H7C1Q1 480 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 AIPO00170 330 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 OR2T1O43869 369 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 SIX6O95475 246 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 F10P00742 488 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 APOC3P02656 99 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 APOBEC1P41238 236 aaKnown RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 RPL27P61353 136 aaKnown RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 HLXQ14774 488 aaPredicted RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 PLPPR5Q32ZL2 321 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 ETV3LQ6ZN32 361 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 NDUFAF7Q7L592 441 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 CEACAM19Q7Z692 300 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 RPS19BP1Q86WX3 136 aaKnown RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 LRRC28Q86X40 367 aaPredicted RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 WDFY1Q8IWB7 410 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 OR4K17Q8NGC6 315 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 OR5T2Q8NGG2 359 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 TRMT10AQ8TBZ6 339 aaKnown RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 C5orf34Q96MH7 638 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 GNRHR2Q96P88 292 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 TAAR9Q96RI9 348 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 PDCD1LG2Q9BQ51 273 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 RASD1Q9Y272 281 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 CEP250Q9BV73 2442 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 A0A1W2PNR3 127 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 MEX3AA1L020 520 aaKnown RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 MS4A18H0YCH9 400 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 PLPP2O43688 288 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 RGS9O75916 674 aaPredicted RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 SFTPDP35247 375 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 BDH1Q02338 343 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 MS4A18Q3C1V0 323 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 SLC25A35Q3KQZ1 300 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 DPY19L4Q7Z388 723 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 PPP1R32Q7Z5V6 425 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 OR2M3Q8NG83 312 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 ABHD4Q8TB40 342 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 SFT2D1Q8WV19 159 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 RNF138Q8WVD3 245 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 PGLYRP3Q96LB9 341 aa10.28□□□□□ -0.76
CLN6-217ENST00000636964 NPDC1Q9NQX5 325 aaPredicted RBP10.28□□□□□ -0.76
CLN6-217ENST00000636964 TP53I11O14683 189 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 SLC16A7O60669 478 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 IFNA4P05014 189 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 OR8G3PP0DMU2 310 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms