RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CISD1Q9NZ45 108 aaKnown RBP13.8□□□□□ -0.2
CLN6-216ENST00000636876 IRGMA1A4Y4 181 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 EFCAB10A6NFE3 127 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 SMPD2O60906 423 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 FAM20BO75063 409 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 ZNF254O75437 659 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 IGHA1P01876 353 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 HSD11B1P28845 292 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 THBS4P35443 961 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 GLRXP35754 106 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 RAD52P43351 418 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 RGS6P49758 472 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 RPS23P62266 143 aaKnown RBP13.79□□□□□ -0.2
CLN6-216ENST00000636876 CSNK2BP67870 215 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 ZNF85Q03923 595 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 DRAM2Q6UX65 266 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 UNQ6126/PRO20091Q6UXV3 157 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 COLCA1Q6ZS62 124 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.79□□□□□ -0.2
CLN6-216ENST00000636876 ZNF679Q8IYX0 411 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 ZNF283Q8N7M2 679 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 BPIFB6Q8NFQ5 453 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 GGHQ92820 318 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 FBXW5Q969U6 566 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 RHNO1Q9BSD3 238 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 C1QTNF5Q9BXJ0 243 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 BCL2L14Q9BZR8 327 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 ZNF442Q9H7R0 627 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 NIPAL2Q9H841 368 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 UBTD1Q9HAC8 227 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 CA10Q9NS85 328 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 CNOT2Q9NZN8 540 aaKnown RBP13.79□□□□□ -0.2
CLN6-216ENST00000636876 PSORS1C1Q9UIG5 152 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 IKZF2Q9UKS7 526 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 MYRFQ9Y2G1 1151 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 LRP12Q9Y561 859 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 POLQO75417 2590 aa13.79□□□□□ -0.2
CLN6-216ENST00000636876 DAPL1A0PJW8 107 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 J3QW42 95 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 PSMD9O00233 223 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 SLC1A7O00341 560 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 DENRO43583 198 aaKnown RBP13.78□□□□□ -0.2
CLN6-216ENST00000636876 GPRIN2O60269 458 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 NGFP01138 241 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 APOC1P02654 83 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 PIPP12273 146 aaPredicted RBP13.78□□□□□ -0.2
CLN6-216ENST00000636876 SLC6A9P48067 706 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 CX3CR1P49238 355 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 EGR3Q06889 387 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 ZNF684Q5T5D7 378 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 VHLLQ6RSH7 139 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 NAA40Q86UY6 237 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 ZNF611Q8N823 705 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 OR1J1Q8NGS3 322 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 ABHD4Q8TB40 342 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 TMEM171Q8WVE6 324 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 DHRS9Q9BPW9 319 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 JAM3Q9BX67 310 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 MROQ9BYG7 248 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 INPP5EQ9NRR6 644 aa13.78□□□□□ -0.2
CLN6-216ENST00000636876 MRM2Q9UI43 246 aaKnown RBP13.78□□□□□ -0.2
CLN6-216ENST00000636876 RAI1Q7Z5J4 1906 aaPredicted RBP13.78□□□□□ -0.2
CLN6-216ENST00000636876 MAGEB4O15481 346 aaPredicted RBP13.77□□□□□ -0.21
CLN6-216ENST00000636876 LCATP04180 440 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 LCKP06239 509 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 DCKP27707 260 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 FABP6P51161 128 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 RIDAP52758 137 aaKnown RBP13.77□□□□□ -0.21
CLN6-216ENST00000636876 KRTAP10-9P60411 292 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 PPP1CBP62140 327 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 ADIPOQQ15848 244 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 ZNF544Q6NX49 715 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 C1orf174Q8IYL3 243 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 SNX33Q8WV41 574 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 APOBEC3DQ96AK3 386 aaPredicted RBP13.77□□□□□ -0.21
CLN6-216ENST00000636876 DOK1Q99704 481 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 FKBP14Q9NWM8 211 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 DIMT1Q9UNQ2 313 aaKnown RBP13.77□□□□□ -0.21
CLN6-216ENST00000636876 STARD10Q9Y365 291 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 CMAHPQ9Y471 501 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 PCDHGB5Q9Y5G0 923 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 CSMD1Q96PZ7 3565 aa13.77□□□□□ -0.21
CLN6-216ENST00000636876 METTL15A6NJ78 407 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 VSTM5A8MXK1 200 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 SULT1C4O75897 302 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 KRT8P05787 483 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 ADRA2AP08913 450 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 CCDC159P0C7I6 412 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 SLC2A1P11166 492 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
CLN6-216ENST00000636876 DCTDP32321 178 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 ZNF121P58317 390 aaPredicted RBP13.76□□□□□ -0.21
CLN6-216ENST00000636876 PSMA6P60900 246 aaKnown RBP13.76□□□□□ -0.21
CLN6-216ENST00000636876 ERVS71-1P61550 626 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 ST3GAL4Q11206 333 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 GALEQ14376 348 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 MSMPQ1L6U9 139 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 CDONQ4KMG0 1287 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 SPATA46Q5T0L3 261 aa13.76□□□□□ -0.21
CLN6-216ENST00000636876 RGS7BPQ6MZT1 257 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms