RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 PMS2P2O95744 297 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 MPIG6BO95866 241 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF735P0CB33 412 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 NPY4RP50391 375 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 FOXF1Q12946 379 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 DNM1P46Q6ZS02 220 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 NUP54Q7Z3B4 507 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 GRINAQ7Z429 371 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 TMEM200AQ86VY9 491 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 SLC38A9Q8NBW4 561 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 C11orf40Q8WZ69 217 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 MRPS24Q96EL2 167 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 TMEM231Q9H6L2 316 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 ASF1BQ9NVP2 202 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 VSX1Q9NZR4 365 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 UPB1Q9UBR1 384 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 IGKV3D-11A0A0A0MRZ8 115 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 RAB27BO00194 218 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 SDCBPO00560 298 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 STK17BO94768 372 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 IFNA6P05013 189 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 NME1P15531 152 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 HSD11B2P80365 405 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 SLC51BQ86UW2 128 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 PAQR4Q8N4S7 273 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 OR1N1Q8NGS0 311 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 SHARPINQ9H0F6 387 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 KCNK7Q9Y2U2 307 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF217O75362 1048 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 BCKDHBP21953 392 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 CCR5P51681 352 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 HSF1Q00613 529 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 ABHD12BQ7Z5M8 362 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 ST7LQ8TDW4 575 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 MRGPRFQ96AM1 343 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 SLAMF6Q96DU3 332 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 PELOQ9BRX2 385 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 OR2S2Q9NQN1 319 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 RPH3AQ9Y2J0 694 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 C5orf63A6NC05 138 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 MPTX1A8MV57 137 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 A8MXK9 166 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 GDF9O60383 454 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 RAMP1O60894 148 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF205O95201 554 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 VSIG8P0DPA2 414 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 CRABP1P29762 137 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 MECP2P51608 486 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 LRRC46Q96FV0 321 aa12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-228ENST00000636610 METTL21EPA6NDL7 271 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 H3BUI4 141 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 RER1O15258 196 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 FADS1O60427 444 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 NPIPB7O75200 414 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 ADAP1O75689 374 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 TTRP02766 147 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 GUSBP08236 651 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 IFI6P09912 130 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 ICAM2P13598 275 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 RNF4P78317 190 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 ROM1Q03395 351 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 TMEM229BQ8NBD8 167 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 BPIFCQ8NFQ6 507 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 GPER1Q99527 375 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 C8orf33Q9H7E9 229 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 A0A0B4J2A0 478 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 OR6C65A6NJZ3 312 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 SOCS1O15524 211 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 TIAF1O95411 115 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 HPP00738 406 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 MT-ATP6P00846 226 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 FGF2P09038 288 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 BDKRB2P30411 391 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 PRAMEF20Q5VT98 475 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 KLHL24Q6TFL4 600 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 NAA40Q86UY6 237 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 OR5M8Q8NGP6 311 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 STT3BQ8TCJ2 826 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 PAQR8Q8TEZ7 354 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 ZC3H10Q96K80 434 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF285Q96NJ3 590 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 ELL3Q9HB65 397 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 ASH2LQ9UBL3 628 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 SHPKQ9UHJ6 478 aa12.49□□□□□ -0.41
CACNA1A-228ENST00000636610 IGHV1OR21-1A0A087WYE8 117 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 CPED1A4D0V7 1026 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 G3V3Y1 287 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 GIMD1P0DJR0 217 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 PGAM2P15259 253 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 IGFBP3P17936 291 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 MC2RQ01718 297 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF273Q14593 569 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 C14orf28Q4W4Y0 310 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 AKIRIN2Q53H80 203 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 C11orf87Q6NUJ2 197 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms