RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 Q6ZR03 302 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 RASSF6Q6ZTQ3 369 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 OR9Q2Q8NGE9 314 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 ZNF418Q8TF45 676 aaPredicted RBP16.03■□□□□ 0.16
CLN6-213ENST00000636212 OR2V2Q96R30 315 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 FN3KQ9H479 309 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 REEP1Q9H902 201 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 G6PC2Q9NQR9 355 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 F5H5K5 113 aa16.02■□□□□ 0.16
CLN6-213ENST00000636212 FOXH1O75593 365 aa16.02■□□□□ 0.16
CLN6-213ENST00000636212 MAGEA2P43356 314 aa16.02■□□□□ 0.16
CLN6-213ENST00000636212 TPTEP56180 551 aa16.02■□□□□ 0.16
CLN6-213ENST00000636212 SRSF2Q01130 221 aaKnown RBP16.02■□□□□ 0.16
CLN6-213ENST00000636212 TRIM25Q14258 630 aaKnown RBP16.02■□□□□ 0.16
CLN6-213ENST00000636212 LCN8Q6JVE9 175 aa16.02■□□□□ 0.16
CLN6-213ENST00000636212 ZNF283Q8N7M2 679 aa16.02■□□□□ 0.16
CLN6-213ENST00000636212 SPTSSAQ969W0 71 aa16.02■□□□□ 0.16
CLN6-213ENST00000636212 CYB5R1Q9UHQ9 305 aa16.02■□□□□ 0.16
CLN6-213ENST00000636212 PRPF19Q9UMS4 504 aaKnown RBP16.02■□□□□ 0.16
CLN6-213ENST00000636212 BAIAP2Q9UQB8 552 aa16.02■□□□□ 0.16
CLN6-213ENST00000636212 TANC2Q9HCD6 1990 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 GASTP01350 101 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 IGHV2-70P01814 119 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 LCATP04180 440 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 BTG1P62324 171 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 LCN2P80188 198 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 TRAP1Q12931 704 aaKnown RBP16.01■□□□□ 0.15
CLN6-213ENST00000636212 TMEM155Q4W5P6 130 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 SPRNQ5BIV9 151 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 OR2T5Q6IEZ7 315 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 CFAP77Q6ZQR2 320 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 MUC20Q8N307 709 aaPredicted RBP16.01■□□□□ 0.15
CLN6-213ENST00000636212 AQP11Q8NBQ7 271 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 OR4C15Q8NGM1 316 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 OR2T29Q8NH02 315 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 BTBD10Q9BSF8 475 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 C1QTNF5Q9BXJ0 243 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 TMEM100Q9NV29 134 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 IL20Q9NYY1 176 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 SAMHD1Q9Y3Z3 626 aaKnown RBP16.01■□□□□ 0.15
CLN6-213ENST00000636212 CUBNO60494 3623 aa16.01■□□□□ 0.15
CLN6-213ENST00000636212 DNHD1Q96M86 4753 aa16■□□□□ 0.15
CLN6-213ENST00000636212 LOC105371242A0A075B767 164 aa16■□□□□ 0.15
CLN6-213ENST00000636212 TCRBV5S2A0A599 114 aa16■□□□□ 0.15
CLN6-213ENST00000636212 LRRC30A6NM36 301 aa16■□□□□ 0.15
CLN6-213ENST00000636212 IQCF6A8MYZ5 107 aa16■□□□□ 0.15
CLN6-213ENST00000636212 BHLHE40O14503 412 aa16■□□□□ 0.15
CLN6-213ENST00000636212 IFNGP01579 166 aa16■□□□□ 0.15
CLN6-213ENST00000636212 ACSM4P0C7M7 580 aa16■□□□□ 0.15
CLN6-213ENST00000636212 MDH2P40926 338 aaKnown RBP16■□□□□ 0.15
CLN6-213ENST00000636212 ERFP50548 548 aa16■□□□□ 0.15
CLN6-213ENST00000636212 CYB561A3Q8NBI2 242 aa16■□□□□ 0.15
CLN6-213ENST00000636212 BHLHE23Q8NDY6 225 aa16■□□□□ 0.15
CLN6-213ENST00000636212 OR10AD1Q8NGE0 317 aa16■□□□□ 0.15
CLN6-213ENST00000636212 NANPQ8TBE9 248 aa16■□□□□ 0.15
CLN6-213ENST00000636212 TSSK6Q9BXA6 273 aa16■□□□□ 0.15
CLN6-213ENST00000636212 C7orf69Q9H7B7 122 aa16■□□□□ 0.15
CLN6-213ENST00000636212 NOP16Q9Y3C1 178 aaKnown RBP16■□□□□ 0.15
CLN6-213ENST00000636212 EPHA1P21709 976 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 FMO3P31513 532 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 PYCR1P32322 319 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 GGT2P36268 569 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 SLC6A9P48067 706 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 RAD23AP54725 363 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 GK3PQ14409 553 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 MICAQ29983 383 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 COLCA1Q6ZS62 124 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 PGAP1Q75T13 922 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 MRPL21Q7Z2W9 205 aaKnown RBP15.99■□□□□ 0.15
CLN6-213ENST00000636212 C1QL2Q7Z5L3 287 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 LRRC28Q86X40 367 aaPredicted RBP15.99■□□□□ 0.15
CLN6-213ENST00000636212 C1orf87Q8N0U7 546 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 OR2T33Q8NG76 320 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 ASB9Q96DX5 294 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 MEGF10Q96KG7 1140 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 JMJD8Q96S16 334 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 SLC30A2Q9BRI3 323 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 TMPRSS13Q9BYE2 586 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 WDR76Q9H967 626 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 PATZ1Q9HBE1 687 aaKnown RBP15.99■□□□□ 0.15
CLN6-213ENST00000636212 GCM1Q9NP62 436 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 U3KQV3 271 aa15.99■□□□□ 0.15
CLN6-213ENST00000636212 PPIAL4EA0A075B759 164 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 PPIAL4CA0A0B4J2A2 164 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 PPIAL4DF5H284 164 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 TMEM178BH3BS89 294 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 M0R135 149 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 PPIAL4FP0DN26 164 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 RAP2AP10114 183 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 IRF2P14316 349 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 MMP16P51512 607 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 BLVRAP53004 296 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 PPP1R8Q12972 351 aaKnown RBP15.98■□□□□ 0.15
CLN6-213ENST00000636212 TAF13Q15543 124 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 ESCO2Q56NI9 601 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 ZNF770Q6IQ21 691 aaPredicted RBP15.98■□□□□ 0.15
CLN6-213ENST00000636212 LNX2Q8N448 690 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 SLC37A3Q8NCC5 494 aa15.98■□□□□ 0.15
CLN6-213ENST00000636212 SPRYD4Q8WW59 207 aaPredicted RBP15.98■□□□□ 0.15
CLN6-213ENST00000636212 ZNF799Q96GE5 643 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms