RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 LOC100289279A0A1B0GTE1 492 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SS18L1O75177 396 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 GPLD1P80108 840 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SPCS2Q15005 226 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM211Q6ICI0 200 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 MOB3BQ86TA1 216 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 C19orf47Q8N9M1 422 aaKnown RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 ABHD4Q8TB40 342 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 HHIPQ96QV1 700 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 SLC25A33Q9BSK2 321 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 GON7Q9BXV9 100 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 XYLT2Q9H1B5 865 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 GPR52Q9Y2T5 361 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 GPR55Q9Y2T6 319 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-212ENST00000636194 E9PCH4 1651 aa5.53□□□□□ -1.52
SCN1A-212ENST00000636194 OR5B21A6NL26 309 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 ST8SIA3O43173 380 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 GPX5O75715 221 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 F7P08709 466 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 FGF2P09038 288 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 NKX2-1P43699 371 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 MEOX2P50222 304 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 HTRA3P83110 453 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SPRYD7Q5W111 196 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 TRAT1Q6PIZ9 186 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 TGIF2LXQ8IUE1 241 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 Q8IYB0 196 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 MDGA1Q8NFP4 955 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 OR4K5Q8NGD3 323 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 OR4C16Q8NGL9 310 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 OR9I1Q8NGQ6 314 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 EDAQ92838 391 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SMIM7Q9BQ49 75 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 NIT2Q9NQR4 276 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 GALPQ9UBC7 116 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SIT1Q9Y3P8 196 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 OR4C46A6NHA9 309 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 RBP4P02753 201 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 OR1C1Q15619 314 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF260Q3ZCT1 412 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 TRMT12Q53H54 448 aaKnown RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CPEB2Q7Z5Q1 589 aaKnown RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CBARPQ8N350 705 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 FAM169BQ8N8A8 192 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 EXD3Q8N9H8 876 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CNIH3Q8TBE1 160 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 C20orf24Q9BUV8 137 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 TECRQ9NZ01 308 aaKnown RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 PGAP2Q9UHJ9 254 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 RIMS3Q9UJD0 308 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 MRPS28Q9Y2Q9 187 aaKnown RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 LMTK2Q8IWU2 1503 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 A0A1W2PPC4 97 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 PMCHP20382 165 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 OPRK1P41145 380 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 HBA1P69905 142 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 KCNMB1Q16558 191 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF534Q76KX8 674 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 LRRC56Q8IYG6 542 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 PHYHIPQ92561 330 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 RNF2Q99496 336 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF768Q9H5H4 540 aaKnown RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CLMPQ9H6B4 373 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 KCNK12Q9HB15 430 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 RAXQ9Y2V3 346 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 LAMA4Q16363 1823 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 DENND4AQ7Z401 1863 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 HEPACAM2A8MVW5 462 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 VAMP5O95183 116 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SIX3O95343 332 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 MT-ATP6P00846 226 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SP1P08047 785 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SFTPCP11686 197 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 B2MP61769 119 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 ABLIM2Q6H8Q1 611 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SPNS3Q6ZMD2 512 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CLEC20AQ6ZU45 233 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 NPEPL1Q8NDH3 523 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SDR9C7Q8NEX9 313 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 OR8J2Q8NGG1 315 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 GPX8Q8TED1 209 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 DYRK2Q92630 601 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SLC23A1Q9UHI7 598 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 M0R1B8 84 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 GSTZ1O43708 216 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 RHBDL1O75783 438 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 GM2AP17900 193 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CLDN8P56748 225 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 SLC35B1P78383 322 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 IGFBP7Q16270 282 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CDKN3Q16667 212 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CTU2Q2VPK5 515 aaKnown RBP5.52□□□□□ -1.53
SCN1A-212ENST00000636194 ADPRMQ3LIE5 342 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 GTDC1Q4AE62 458 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 PHLDA2Q53GA4 152 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 OR2T2Q6IF00 324 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 WFDC8Q8IUA0 241 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CPOQ8IVL8 374 aa5.52□□□□□ -1.53
SCN1A-212ENST00000636194 CLDN19Q8N6F1 224 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms