RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 VAMP3Q15836 100 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 C18orf63Q68DL7 685 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 OPALINQ96PE5 141 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 ARHGDIGQ99819 225 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 XYLT2Q9H1B5 865 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 ESPL1Q14674 2120 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 HELTA6NFD8 242 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 DRGXA6NNA5 263 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 E5RGE8 158 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 H0YIG0 161 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 SDCBPO00560 298 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-209ENST00000635750 CSO75390 466 aaKnown RBP5.07□□□□□ -1.6
SCN1A-209ENST00000635750 SRFP11831 508 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 TM4SF4P48230 202 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 TPPP2P59282 170 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 RANP62826 216 aaKnown RBP5.07□□□□□ -1.6
SCN1A-209ENST00000635750 HTR4Q13639 388 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 RTP5Q14D33 572 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 SYPL1Q16563 259 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF766Q5HY98 468 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 TMEM182Q6ZP80 229 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-209ENST00000635750 TRILQ7L0X0 811 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 CALHM3Q86XJ0 350 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 ETFBKMTQ8IXQ9 262 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 SLC38A9Q8NBW4 561 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 OR52N5Q8NH56 324 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 GHSRQ92847 366 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 OXGR1Q96P68 337 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 SARGQ9BW04 601 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 PSENENQ9NZ42 101 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 OR5V1Q9UGF6 321 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 OSGIN1Q9UJX0 560 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 M0R135 149 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 ZDHHC11BP0C7U3 371 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 BATF2Q8N1L9 274 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 DTWD1Q8N5C7 304 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 NPWQ8N729 165 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 PLPP7Q8NBV4 271 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 OR5D13Q8NGL4 314 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 OR5M9Q8NGP3 310 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 OR10K1Q8NGX5 313 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF799Q96GE5 643 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 RASL11BQ9BPW5 248 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 PSD2Q9BQI7 771 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 CHST8Q9H2A9 424 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 OCIAD1Q9NX40 245 aa5.07□□□□□ -1.6
SCN1A-209ENST00000635750 COA3Q9Y2R0 106 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-209ENST00000635750 F2RL2O00254 374 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 TYROBPO43914 113 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 DUS4LO95620 317 aaKnown RBP5.06□□□□□ -1.6
SCN1A-209ENST00000635750 CD200P41217 278 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 RAB9AP51151 201 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 KIAA1024LP59773 190 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 REEP5Q00765 189 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 RNPS1Q15287 305 aaKnown RBP5.06□□□□□ -1.6
SCN1A-209ENST00000635750 ABI3BPQ7Z7G0 1075 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 DNAJC5GQ8N7S2 189 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 NECAP1Q8NC96 275 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 OR1L4Q8NGR5 311 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 OLIG1Q8TAK6 271 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 UBALD1Q8TB05 177 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 SLCO4A1Q96BD0 722 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 MIEN1Q9BRT3 115 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 SDR39U1Q9NRG7 319 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-209ENST00000635750 ADAMTS6Q9UKP5 1117 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 LSM2Q9Y333 95 aaKnown RBP5.06□□□□□ -1.6
SCN1A-209ENST00000635750 POMT1Q9Y6A1 747 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 POM121CA8CG34 1229 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 TARM1B6A8C7 271 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 TNFRSF10CO14798 259 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 SOD1P00441 154 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 EPXP11678 715 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 HTN1P15515 57 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 HOXD9P28356 352 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-209ENST00000635750 PCSK6P29122 969 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 NKX2-5P52952 324 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-209ENST00000635750 VWA1Q6PCB0 445 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 TBPL2Q6SJ96 375 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 SIAH1Q8IUQ4 282 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 Q8IYB0 196 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 LURAP1Q96LR2 239 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 QRSL1Q9H0R6 528 aaKnown RBP5.06□□□□□ -1.6
SCN1A-209ENST00000635750 BANF2Q9H503 90 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 PAPLNO95428 1278 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 GLULP15104 373 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 CBR1P16152 277 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 PSMB1P20618 241 aaKnown RBP5.06□□□□□ -1.6
SCN1A-209ENST00000635750 ACHEP22303 614 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 SSTR2P30874 369 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 GDNFP39905 211 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 CTSCP53634 463 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 HTRA3P83110 453 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 MS4A2Q01362 244 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 DOLPP1Q86YN1 238 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 OR13H1Q8NG92 308 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 A4GALTQ9NPC4 353 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 GMPR2Q9P2T1 348 aaKnown RBP5.06□□□□□ -1.6
SCN1A-209ENST00000635750 HRO43593 1189 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 IL5P05113 134 aa5.06□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF239Q16600 458 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms