RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 KRR1Q13601 381 aaKnown RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 OCLNQ16625 522 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 AGBL2Q5U5Z8 902 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 GPR157Q5UAW9 335 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 DUX4L9Q6RFH8 374 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 OFCC1Q8IZS5 231 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 OR13G1Q8NGZ3 307 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 FAM110DQ8TAY7 271 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 FAM46AQ96IP4 442 aaKnown RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 ZNF582Q96NG8 517 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 ZNF570Q96NI8 536 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 ECSITQ9BQ95 431 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 POLR2J2Q9GZM3 115 aaKnown RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 NUAK2Q9H093 628 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 POLR2J3Q9H1A7 115 aaKnown RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 MMP27Q9H306 513 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 MMADHCQ9H3L0 296 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-206ENST00000634451 GRHPRQ9UBQ7 328 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 DUX4Q9UBX2 424 aa10.67□□□□□ -0.7
LINC00339-206ENST00000634451 IQCF6A8MYZ5 107 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 SOCS2O14508 198 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 MRASO14807 208 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 CRYBA1P05813 215 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 FPR3P25089 353 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 PSMB10P40306 273 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 SRP9P49458 86 aaKnown RBP10.66□□□□□ -0.7
LINC00339-206ENST00000634451 RAD23AP54725 363 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 PROK1P58294 105 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 POU4F2Q12837 409 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 ZNF730Q6ZMV8 503 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 CFAP77Q6ZQR2 320 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 LINC00346Q8IVM7 164 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 PCYOX1LQ8NBM8 494 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 OR8J3Q8NGG0 315 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 FNDC8Q8TC99 324 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 DYDC1Q8WWB3 177 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 PLEKHA8Q96JA3 519 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 TECTBQ96PL2 329 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 RPS6KA6Q9UK32 745 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 RNF114Q9Y508 228 aa10.66□□□□□ -0.7
LINC00339-206ENST00000634451 FAM220BPB1ANY3 271 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 M0QZ24 198 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 XKRYO14609 159 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 TNFRSF13BO14836 293 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-206ENST00000634451 KHDRBS3O75525 346 aaKnown RBP10.65□□□□□ -0.7
LINC00339-206ENST00000634451 CDKN2AP42771 156 aaKnown RBP10.65□□□□□ -0.7
LINC00339-206ENST00000634451 SELENOWP63302 87 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 CYLC2Q14093 348 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-206ENST00000634451 GK2Q14410 553 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-206ENST00000634451 TRAM2Q15035 370 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 ZBED5Q49AG3 693 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 Q6ZSV7 163 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 ZNF826PQ6ZT77 177 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 NLRC3Q7RTR2 1065 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 GLB1L2Q8IW92 636 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 PIP4P2Q8N4L2 257 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 TSPEARQ8WU66 669 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 LHX4Q969G2 390 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 ATP6V1G3Q96LB4 118 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 FNDC11Q9BVV2 318 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 SIRPDQ9H106 197 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 CMTM6Q9NX76 183 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 ADA2Q9NZK5 511 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 POLR1DQ9Y2S0 133 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 IER3IP1Q9Y5U9 82 aa10.65□□□□□ -0.7
LINC00339-206ENST00000634451 IGHV3OR15-7A0A075B7D8 119 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 LOC100653049A0A140TA62 436 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 ZNF879B4DU55 563 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 PHYHO14832 338 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 ENSAO43768 121 aaKnown RBP10.64□□□□□ -0.71
LINC00339-206ENST00000634451 EDF1O60869 148 aaKnown RBP10.64□□□□□ -0.71
LINC00339-206ENST00000634451 KRT34O76011 436 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 TOX4O94842 621 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 ACSM4P0C7M7 580 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 PSKH1P11801 424 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 TUBG1P23258 451 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 CENPAP49450 140 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 HIST1H3AP68431 136 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 ZNF181Q2M3W8 571 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 KRTAP27-1Q3LI81 207 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 ZNF362Q5T0B9 420 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-206ENST00000634451 HIST2H3PS2Q5TEC6 136 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 ZNF620Q6ZNG0 422 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 COLCA1Q6ZS62 124 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 MBOAT2Q6ZWT7 520 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 HIST2H3AQ71DI3 136 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 OR2T12Q8NG77 320 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 ACOT11Q8WXI4 607 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-206ENST00000634451 UBE2FQ969M7 185 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 APOBEC3DQ96AK3 386 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-206ENST00000634451 WDFY2Q96P53 400 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 TMEM120AQ9BXJ8 343 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 FN3KQ9H479 309 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 NOX4Q9NPH5 578 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 TUBG2Q9NRH3 451 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 TMEM100Q9NV29 134 aa10.64□□□□□ -0.71
LINC00339-206ENST00000634451 VSX1Q9NZR4 365 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-206ENST00000634451 DNAJB11Q9UBS4 358 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms