RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 TMEM212A6NML5 194 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 INMT-MINDY4F8WBC2 141 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 DHHO43323 396 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 IGF2P01344 180 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 OPRM1P35372 400 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 SELENOPP49908 381 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 RPS4XP62701 263 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 UPRTQ96BW1 309 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZNF385AQ96PM9 386 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 C7orf50Q9BRJ6 194 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 SRXN1Q9BYN0 137 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 GLTPQ9NZD2 209 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 HIF3AQ9Y2N7 669 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 V9GY05 133 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 A0A1W2PR80 420 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 BTCP35070 178 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 PSMB10P40306 273 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 FMODQ06828 376 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 SFXN4Q6P4A7 337 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 VHLLQ6RSH7 139 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 SLC7A6Q92536 515 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 ABCG5Q9H222 651 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 CYSLTR2Q9NS75 346 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 SPRR3Q9UBC9 169 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 EIF3KQ9UBQ5 218 aaKnown RBP11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 NDRG3Q9UGV2 375 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 MST1P26927 711 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 GNALP38405 381 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 HCCSP53701 268 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 C19orf57Q0VDD7 668 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 NDUFA5Q16718 116 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 SLC36A2Q495M3 483 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 MTFR2Q6P444 385 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 DPY19L4Q7Z388 723 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZPLD1Q8TCW7 415 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 NMNAT2Q9BZQ4 307 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 ACTR6Q9GZN1 396 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 LYRM1O43325 122 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 HOXD4P09016 255 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 IDH3GP51553 393 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 ART1P52961 327 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 PCBD1P61457 104 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 ALKBH1Q13686 389 aaKnown RBP11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 CDK5R1Q15078 307 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 Q5BKY6 102 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 FAM57AQ8TBR7 257 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 SMIM19Q96E16 107 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 GLRX2Q9NS18 164 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 MCUBQ9NWR8 336 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 ERRFI1Q9UJM3 462 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 NOTCH2Q04721 2471 aa11.03□□□□□ -0.64
SYNGAP1-207ENST00000628646 CPAMD8Q8IZJ3 1885 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 IGLV3-32A0A0A0MS00 114 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 A0A1B0GVI7 797 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZNF814B7Z6K7 855 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 PYCARD-AS1I3L0S3 204 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZNF593O00488 134 aaPredicted RBP11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 DNPH1O43598 174 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 SSNA1O43805 119 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 CEACAM4O75871 244 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 LCATP04180 440 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 EIF4EP06730 217 aaKnown RBP11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 EDN3P14138 238 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 RPS27P42677 84 aaKnown RBP11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 HTR5AP47898 357 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 CAPSLQ8WWF8 208 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 AK6Q9Y3D8 172 aaKnown RBP11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZNF175Q9Y473 711 aa11.02□□□□□ -0.64
SYNGAP1-207ENST00000628646 A0A0G2JMP0 313 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 A0A0X1KG70 313 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 METTL21EPA6NDL7 271 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 A8MV72 311 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 PRR32B1ATL7 298 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 OR8G3PP0DMU2 310 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 CDAP32320 146 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 CCDC92Q53HC0 331 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 THEM4Q5T1C6 240 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 TMEM244Q5VVB8 128 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 TMEM81Q6P7N7 255 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 OR4M2Q8NGB6 313 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 OR13C5Q8NGS8 318 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 FCAMRQ8WWV6 532 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 RAB40AQ8WXH6 277 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 PGAM5Q96HS1 289 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 GMPPAQ96IJ6 420 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 SF3B5Q9BWJ5 86 aaKnown RBP11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 RBFOX1Q9NWB1 397 aaKnown RBP11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 MAGEB4O15481 346 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 OGG1O15527 345 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 APOC1P02654 83 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 PRB1P04280 392 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 ZNF708P17019 499 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 ZNF20P17024 532 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 EGR4Q05215 589 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 IGFBP7Q16270 282 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 Q499Y3 187 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 FAM214BQ7L5A3 538 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 NPEPL1Q8NDH3 523 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 HSD17B8Q92506 261 aa11.02□□□□□ -0.65
SYNGAP1-207ENST00000628646 WNT2BQ93097 391 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms