RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 SELENOVP59797 346 aa17.41■□□□□ 0.38
PTCD3-220ENST00000627371 SNRPGP62308 76 aaKnown RBP17.41■□□□□ 0.38
PTCD3-220ENST00000627371 GRB2P62993 217 aaKnown RBP17.41■□□□□ 0.38
PTCD3-220ENST00000627371 SLC25A30Q5SVS4 291 aa17.41■□□□□ 0.38
PTCD3-220ENST00000627371 COLCA1Q6ZS62 124 aa17.41■□□□□ 0.38
PTCD3-220ENST00000627371 ZNF771Q7L3S4 317 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-220ENST00000627371 KLF14Q8TD94 323 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-220ENST00000627371 UBE2FQ969M7 185 aa17.41■□□□□ 0.38
PTCD3-220ENST00000627371 ZNF799Q96GE5 643 aa17.41■□□□□ 0.38
PTCD3-220ENST00000627371 ZNF582Q96NG8 517 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-220ENST00000627371 AMELYQ99218 206 aa17.41■□□□□ 0.38
PTCD3-220ENST00000627371 KCNJ15Q99712 375 aa17.41■□□□□ 0.38
PTCD3-220ENST00000627371 C1QTNF5Q9BXJ0 243 aa17.41■□□□□ 0.38
PTCD3-220ENST00000627371 A0A1W2PPW3 197 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 M0R233 179 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 IGHV3-13P01766 116 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 ALOX5APP20292 161 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 GCH1P30793 250 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 MPV17P39210 176 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 SLC15A1P46059 708 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 TMED1Q13445 227 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 TAF13Q15543 124 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 SPATC1Q76KD6 591 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 KRTAP1-3Q8IUG1 177 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 ZNF555Q8NEP9 628 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 THEM6Q8WUY1 208 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 RFKQ969G6 155 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 POFUT1Q9H488 388 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 ADGRL4Q9HBW9 690 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 DYNLRB1Q9NP97 96 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 SLCO1C1Q9NYB5 712 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 LAMP5Q9UJQ1 280 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 KLHDC2Q9Y2U9 406 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 STARD10Q9Y365 291 aa17.4■□□□□ 0.38
PTCD3-220ENST00000627371 MAP1AP78559 2803 aaPredicted RBP17.39■□□□□ 0.38
PTCD3-220ENST00000627371 NDUFS7O75251 213 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 IGHV4-39P01824 125 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 GABRB1P18505 474 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 OPRL1P41146 370 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 OCLNQ16625 522 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 Q5PR19 223 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 MEDAGQ5VYS4 303 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 SHEQ5VZ18 495 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 PRSS57Q6UWY2 283 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 DRAM2Q6UX65 266 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 ENTHD1Q8IYW4 607 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 OR5L1Q8NGL2 311 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 BARX1Q9HBU1 254 aaPredicted RBP17.39■□□□□ 0.37
PTCD3-220ENST00000627371 TMEM14AQ9Y6G1 99 aa17.39■□□□□ 0.37
PTCD3-220ENST00000627371 ZNF469Q96JG9 3925 aaPredicted RBP17.39■□□□□ 0.37
PTCD3-220ENST00000627371 MPZL2O60487 215 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 SBK2P0C263 348 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 HSD11B1P28845 292 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 ALDH3B1P43353 468 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 SLC6A9P48067 706 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 PRKXP51817 358 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 HCCSP53701 268 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 POU4F2Q12837 409 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 MAD2L1BPQ15013 274 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-220ENST00000627371 MOGQ16653 247 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 TMEM255AQ5JRV8 349 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 SPNS3Q6ZMD2 512 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 NAA40Q86UY6 237 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 OR51G2Q8NGK0 314 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 SORCS2Q96PQ0 1159 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 MNTQ99583 582 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 VRK1Q99986 396 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-220ENST00000627371 VCXQ9H320 206 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 TAAR3PQ9P1P4 343 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 GPR160Q9UJ42 338 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTCD3-220ENST00000627371 ITPR3Q14573 2671 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 CELSR1Q9NYQ6 3014 aa17.38■□□□□ 0.37
PTCD3-220ENST00000627371 ENTPD6O75354 484 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 LCATP04180 440 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 ADRA2AP08913 450 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 H2BFMP0C1H6 154 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 NKPD1Q17RQ9 610 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 TTC23Q5W5X9 447 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 SLC35F2Q8IXU6 374 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 RHOXF1Q8NHV9 184 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 APOL4Q9BPW4 351 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 RAB1BQ9H0U4 201 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 MS4A5Q9H3V2 200 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 CLN6Q9NWW5 311 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 PTTG3PQ9NZH4 202 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 COPS3Q9UNS2 423 aa17.37■□□□□ 0.37
PTCD3-220ENST00000627371 PHYHO14832 338 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 APOC1P02654 83 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 CX3CR1P49238 355 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 EFNA4P52798 201 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 PSG7Q13046 419 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 KCTD18Q6PI47 426 aaPredicted RBP17.36■□□□□ 0.37
PTCD3-220ENST00000627371 LRRN1Q6UXK5 716 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 FBXW12Q6X9E4 464 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 ZCCHC24Q8N2G6 241 aaKnown RBP17.36■□□□□ 0.37
PTCD3-220ENST00000627371 DHRSXQ8N5I4 330 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 ZNF283Q8N7M2 679 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 SNX33Q8WV41 574 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 CYGBQ8WWM9 190 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms