RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PRIMA1Q86XR5 153 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 TIMD4Q96H15 378 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 PNRC2Q9NPJ4 139 aaKnown RBP18.99■□□□□ 0.63
SF1-220ENST00000626028 ANK3Q12955 4377 aaKnown RBP18.99■□□□□ 0.63
SF1-220ENST00000626028 B4DSR2 109 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 H3BN98 237 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 DEAF1O75398 565 aaPredicted RBP18.98■□□□□ 0.63
SF1-220ENST00000626028 ACSM4P0C7M7 580 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 TNFRSF1AP19438 455 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 HNF1AP20823 631 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 PAICSP22234 425 aaKnown RBP18.98■□□□□ 0.63
SF1-220ENST00000626028 PYCR1P32322 319 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 LINC00346Q8IVM7 164 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 GTF3AQ92664 365 aaKnown RBP18.98■□□□□ 0.63
SF1-220ENST00000626028 RAB1CQ92928 201 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 SPTSSAQ969W0 71 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 BEX2Q9BXY8 128 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 SHARPINQ9H0F6 387 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 POFUT1Q9H488 388 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 COMMD3-BMI1R4GMX3 469 aa18.98■□□□□ 0.63
SF1-220ENST00000626028 CDC14BO60729 498 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 OSMP13725 252 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 SELEP16581 610 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 SPI1P17947 270 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 OTX1P32242 354 aaPredicted RBP18.97■□□□□ 0.63
SF1-220ENST00000626028 THBS2P35442 1172 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 ENTPD1P49961 510 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 TPTEP56180 551 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 TNFAIP6P98066 277 aaPredicted RBP18.97■□□□□ 0.63
SF1-220ENST00000626028 RHOUQ7L0Q8 258 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 TMEM179BQ7Z7N9 219 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 CLDND2Q8NHS1 167 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 MAP6Q96JE9 813 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 HCAR1Q9BXC0 346 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 MSL2Q9HCI7 577 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 IL19Q9UHD0 177 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 MXRA5Q9NR99 2828 aa18.97■□□□□ 0.63
SF1-220ENST00000626028 ATRQ13535 2644 aa18.96■□□□□ 0.63
SF1-220ENST00000626028 HMGN1P05114 100 aa18.96■□□□□ 0.63
SF1-220ENST00000626028 ANPEPP15144 967 aa18.96■□□□□ 0.63
SF1-220ENST00000626028 IL2RGP31785 369 aa18.96■□□□□ 0.63
SF1-220ENST00000626028 DVL1P1P54792 670 aaPredicted RBP18.96■□□□□ 0.63
SF1-220ENST00000626028 MALLQ13021 153 aa18.96■□□□□ 0.63
SF1-220ENST00000626028 SHQ1Q6PI26 577 aaKnown RBP18.96■□□□□ 0.63
SF1-220ENST00000626028 PEG10Q86TG7 708 aaKnown RBP18.96■□□□□ 0.63
SF1-220ENST00000626028 OR9Q1Q8NGQ5 310 aa18.96■□□□□ 0.63
SF1-220ENST00000626028 SLCO4A1Q96BD0 722 aa18.96■□□□□ 0.63
SF1-220ENST00000626028 SOX7Q9BT81 388 aa18.96■□□□□ 0.63
SF1-220ENST00000626028 TEX12Q9BXU0 123 aa18.96■□□□□ 0.63
SF1-220ENST00000626028 A0A1B0GWJ7 208 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 IQCF6A8MYZ5 107 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 F5H5K5 113 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 IFNL4K9M1U5 179 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 IGFBP5P24593 272 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 DRAM2Q6UX65 266 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 OR8G5Q8NG78 346 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 OR13G1Q8NGZ3 307 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 RAB39BQ96DA2 213 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 ZNF582Q96NG8 517 aaPredicted RBP18.95■□□□□ 0.62
SF1-220ENST00000626028 PTTG3PQ9NZH4 202 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 WNK2Q9Y3S1 2297 aa18.95■□□□□ 0.62
SF1-220ENST00000626028 DOCK11Q5JSL3 2073 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 M0R135 149 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 LMO4P61968 165 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 CDK5Q00535 292 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 LINC01590Q5TEZ4 76 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 Q6ZR03 302 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 DCXRQ7Z4W1 244 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 OR2Z1Q8NG97 314 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 OR51L1Q8NGJ5 315 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 OR10S1Q8NGN2 331 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 ZNRF4Q8WWF5 429 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 CCL17Q92583 94 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 ZNF799Q96GE5 643 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 WDR76Q9H967 626 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 MARCH7Q9H992 704 aa18.94■□□□□ 0.62
SF1-220ENST00000626028 TVP23AA6NH52 213 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 ZNF593O00488 134 aaPredicted RBP18.93■□□□□ 0.62
SF1-220ENST00000626028 SLC15A1P46059 708 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 DBPQ10586 325 aaPredicted RBP18.93■□□□□ 0.62
SF1-220ENST00000626028 CCNIQ14094 377 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 GINS1Q14691 196 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 HLXQ14774 488 aaPredicted RBP18.93■□□□□ 0.62
SF1-220ENST00000626028 FAM120AOSQ5T036 256 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 PARP8Q8N3A8 854 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 ATG16L2Q8NAA4 619 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 ZNF511Q8NB15 262 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 OR6K6Q8NGW6 343 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 UTP4Q969X6 686 aaKnown RBP18.93■□□□□ 0.62
SF1-220ENST00000626028 DUS3LQ96G46 650 aaKnown RBP18.93■□□□□ 0.62
SF1-220ENST00000626028 SLC30A2Q9BRI3 323 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 OPA3Q9H6K4 179 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 NTN4Q9HB63 628 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 WIPI2Q9Y4P8 454 aa18.93■□□□□ 0.62
SF1-220ENST00000626028 ZNF878C9JN71 531 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 PRODHO43272 600 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 GLCEO94923 617 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 APOC1P02654 83 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 LCATP04180 440 aa18.92■□□□□ 0.62
SF1-220ENST00000626028 GYPBP06028 91 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms