RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 FAM220BPB1ANY3 271 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 IFNL4K9M1U5 179 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 MRASO14807 208 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 AHCYL1O43865 530 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 KRT34O76011 436 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 IFNA14P01570 189 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 RPL4P36578 427 aaKnown RBP9.16□□□□□ -0.94
DDX41-218ENST00000625286 CFHR2P36980 270 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 GATA4P43694 442 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 SRP9P49458 86 aaKnown RBP9.16□□□□□ -0.94
DDX41-218ENST00000625286 RAD23AP54725 363 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 SF3A3Q12874 501 aaKnown RBP eCLIP9.16□□□□□ -0.94
DDX41-218ENST00000625286 KLF10Q13118 480 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 ANKDD1AQ495B1 522 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 PRAMEF6Q5VXH4 476 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 METTL21CQ5VZV1 264 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 ERICH5Q6P6B1 374 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 MBOAT2Q6ZWT7 520 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 GLB1L2Q8IW92 636 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 RNF113BQ8IZP6 322 aaKnown RBP9.16□□□□□ -0.94
DDX41-218ENST00000625286 OR8B3Q8NGG8 313 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 LINC01006Q8NI28 216 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 ACOT11Q8WXI4 607 aaPredicted RBP9.16□□□□□ -0.94
DDX41-218ENST00000625286 ZDHHC16Q969W1 377 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 MAGEB18Q96M61 343 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 COG8Q96MW5 612 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 ZNF582Q96NG8 517 aaPredicted RBP9.16□□□□□ -0.94
DDX41-218ENST00000625286 OR8B2Q96RD0 313 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 SH3GL1Q99961 368 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 RBM4BQ9BQ04 359 aaKnown RBP9.16□□□□□ -0.94
DDX41-218ENST00000625286 FNDC11Q9BVV2 318 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 RASSF4Q9H2L5 321 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 RERGLQ9H628 205 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 SMURF1Q9HCE7 757 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 INTS9Q9NV88 658 aaKnown RBP9.16□□□□□ -0.94
DDX41-218ENST00000625286 SIGLEC7Q9Y286 467 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 DNAH3Q8TD57 4116 aa9.16□□□□□ -0.94
DDX41-218ENST00000625286 FAM20BO75063 409 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 KHDRBS3O75525 346 aaKnown RBP9.15□□□□□ -0.94
DDX41-218ENST00000625286 FPR3P25089 353 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 KRR1Q13601 381 aaKnown RBP9.15□□□□□ -0.94
DDX41-218ENST00000625286 GK2Q14410 553 aaPredicted RBP9.15□□□□□ -0.94
DDX41-218ENST00000625286 COQ5Q5HYK3 327 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 ZNF362Q5T0B9 420 aaPredicted RBP9.15□□□□□ -0.94
DDX41-218ENST00000625286 CGB2Q6NT52 195 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 ZNF730Q6ZMV8 503 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 C17orf107Q6ZR85 190 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 DCDC5Q6ZRR9 648 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 C1QL4Q86Z23 238 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 OR2T12Q8NG77 320 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 OR4F5Q8NH21 305 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 Q8TCH9 128 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 SLC7A13Q8TCU3 470 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 DYDC1Q8WWB3 177 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 APOBEC3DQ96AK3 386 aaPredicted RBP9.15□□□□□ -0.94
DDX41-218ENST00000625286 FAM46AQ96IP4 442 aaKnown RBP9.15□□□□□ -0.94
DDX41-218ENST00000625286 PLEKHA8Q96JA3 519 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 ZNF570Q96NI8 536 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 CCT8L2Q96SF2 557 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 PKP2Q99959 881 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 PCGF1Q9BSM1 259 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 TMEM120AQ9BXJ8 343 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 NOX4Q9NPH5 578 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 SAR1AQ9NR31 198 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 UFSP2Q9NUQ7 469 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 TMEM100Q9NV29 134 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 CLN8Q9UBY8 286 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 IER3IP1Q9Y5U9 82 aa9.15□□□□□ -0.94
DDX41-218ENST00000625286 IGLV1-36A0A0B4J1U3 117 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 A0A1B0GUS0 222 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 ELOVL7A1L3X0 281 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 ZNF879B4DU55 563 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 J3QW42 95 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 SOCS2O14508 198 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 XKRYO14609 159 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 PHYHO14832 338 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 PPP1R3DO95685 299 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 TSPAN15O95858 294 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 NPPAP01160 153 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 IGHV4-59P01825 116 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 IFNW1P05000 195 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 VIMP08670 466 aaKnown RBP9.14□□□□□ -0.95
DDX41-218ENST00000625286 ACSM4P0C7M7 580 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 SDHAP31040 664 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 OMPP47874 163 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 RGS6P49758 472 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 PROK1P58294 105 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 ELF3P78545 371 aaPredicted RBP9.14□□□□□ -0.95
DDX41-218ENST00000625286 SEC23BQ15437 767 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 GPR157Q5UAW9 335 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 SFRP4Q6FHJ7 346 aaPredicted RBP9.14□□□□□ -0.95
DDX41-218ENST00000625286 BRICD5Q6PL45 260 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 CFAP77Q6ZQR2 320 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.14□□□□□ -0.95
DDX41-218ENST00000625286 SLC15A3Q8IY34 581 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 OR6V1Q8N148 313 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 FGFRL1Q8N441 504 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 OR5L1Q8NGL2 311 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 GPX7Q96SL4 187 aaPredicted RBP9.14□□□□□ -0.95
DDX41-218ENST00000625286 COQ7Q99807 217 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms