RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 LINC00477Q96M19 166 aa1.53□□□□□ -2.16
CHD2-203ENST00000625243 ANKRD60Q9BZ19 345 aa1.53□□□□□ -2.16
CHD2-203ENST00000625243 UCK2Q9BZX2 261 aa1.53□□□□□ -2.16
CHD2-203ENST00000625243 SAV1Q9H4B6 383 aaPredicted RBP1.53□□□□□ -2.16
CHD2-203ENST00000625243 RETNQ9HD89 108 aa1.53□□□□□ -2.16
CHD2-203ENST00000625243 MYOZ1Q9NP98 299 aaPredicted RBP1.53□□□□□ -2.16
CHD2-203ENST00000625243 NECAP2Q9NVZ3 263 aa1.53□□□□□ -2.16
CHD2-203ENST00000625243 RABL2AQ9UBK7 228 aaPredicted RBP1.53□□□□□ -2.16
CHD2-203ENST00000625243 YTHDF2Q9Y5A9 579 aaKnown RBP1.53□□□□□ -2.16
CHD2-203ENST00000625243 CHD4Q14839 1912 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 BAZ1AQ9NRL2 1556 aaPredicted RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 PTPRTO14522 1441 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 UBN2Q6ZU65 1347 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 WDR19Q8NEZ3 1342 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 IGLV1-36A0A0B4J1U3 117 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 TRAV40A0A0B4J280 105 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 A0A1B0GW55 424 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 TMEM223A0PJW6 202 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 GOLGA8JA6NMD2 632 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 SUPT3HB4E1H0 165 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 L7N2F9 121 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 SLC9A3R1O14745 358 aaPredicted RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 CASC3O15234 703 aaKnown RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 RBFOX2O43251 390 aaKnown RBP eCLIP1.52□□□□□ -2.17
CHD2-203ENST00000625243 CHST10O43529 356 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 EIF1BO60739 113 aaKnown RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 HSBP1O75506 76 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 SLC22A5O76082 557 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 AQP8O94778 261 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 WISP3O95389 354 aaPredicted RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 APCSP02743 223 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 ADRA2AP08913 450 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 UBCP0CG48 685 aaKnown RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 DUX4L2P0CJ85 424 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 DUX4L3P0CJ86 424 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 DUX4L5P0CJ88 424 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 DUX4L6P0CJ89 424 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 DUX4L7P0CJ90 424 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 GOLGA8HP0CJ92 632 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 STAG3L3P0CL85 134 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 OR8G3PP0DMU2 310 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 C1GALT1C1LP0DN25 315 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 RALBP11234 206 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 RAB5AP20339 215 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 HTR1DP28221 377 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 RFC3P40938 356 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 EIF1P41567 113 aaKnown RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 AP1S2P56377 157 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 CLDN18P56856 261 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 SYNJ2BPP57105 145 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 LINC00315P59091 139 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 YWHAEP62258 255 aaKnown RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 GBE1Q04446 702 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 LOXL1Q08397 574 aaPredicted RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 DNAJC3Q13217 504 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 ZNF266Q14584 549 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 ZNF726P1Q15940 193 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 SMUG1Q53HV7 270 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 ZNF684Q5T5D7 378 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 PLCXD3Q63HM9 321 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 ADNP2Q6IQ32 1131 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 RWDD4Q6NW29 188 aaKnown RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 H3F3CQ6NXT2 135 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 CLEC2AQ6UVW9 174 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 TMCO2Q7Z6W1 182 aaPredicted RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 MDP1Q86V88 176 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 KATNAL2Q8IYT4 538 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 MYOCDQ8IZQ8 938 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 VKORC1L1Q8N0U8 176 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 INO80EQ8NBZ0 244 aaPredicted RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 OR9A2Q8NGT5 310 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 LILRB4Q8NHJ6 448 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 C15orf40Q8WUR7 153 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 RGP1Q92546 391 aaPredicted RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 PTX4Q96A99 478 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 FLYWCH2Q96CP2 140 aaKnown RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 HAUS1Q96CS2 278 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 RCN3Q96D15 328 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 BTN2A3PQ96KV6 586 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 DOK1Q99704 481 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 TBL1YQ9BQ87 522 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 RSG1Q9BU20 258 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 TEKT3Q9BXF9 490 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 TMEM38AQ9H6F2 299 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 ZNF430Q9H8G1 570 aaPredicted RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 C12orf10Q9HB07 376 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 BEX1Q9HBH7 125 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 TMEM27Q9HBJ8 222 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 MRPS30Q9NP92 439 aaKnown RBP1.52□□□□□ -2.17
CHD2-203ENST00000625243 PXMP2Q9NR77 195 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 AGPAT4Q9NRZ5 378 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 MCUBQ9NWR8 336 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 CLN6Q9NWW5 311 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 RHBDL2Q9NX52 303 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 SLC39A1Q9NY26 324 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 ADA2Q9NZK5 511 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 DUX4Q9UBX2 424 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 PSME2Q9UL46 239 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 TBC1D24Q9ULP9 559 aa1.52□□□□□ -2.17
CHD2-203ENST00000625243 DDX19BQ9UMR2 479 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms