RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 ERVK13-1Q9NX77 482 aa10.76□□□□□ -0.69
LINC00963-216ENST00000623185 CISD1Q9NZ45 108 aaKnown RBP10.76□□□□□ -0.69
LINC00963-216ENST00000623185 EXOSC1Q9Y3B2 195 aaKnown RBP10.76□□□□□ -0.69
LINC00963-216ENST00000623185 ATP6V1G2-DDX39BF2Z307 99 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 ABHD16AO95870 558 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 PLAUP00749 431 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 NGFP01138 241 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 KRT8P05787 483 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 APOBEC3AP31941 199 aaPredicted RBP10.75□□□□□ -0.69
LINC00963-216ENST00000623185 WNT5AP41221 380 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 PRKXP51817 358 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 RIDAP52758 137 aaKnown RBP10.75□□□□□ -0.69
LINC00963-216ENST00000623185 ACTA2P62736 377 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 ACTG2P63267 376 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 SLC35A2P78381 396 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF544Q6NX49 715 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 SPATC1Q76KD6 591 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 SSX6Q7RTT6 188 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 PRSS45Q7RTY3 260 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 SYS1Q8N2H4 156 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 STX19Q8N4C7 294 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 HAVCR2Q8TDQ0 301 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 ITFG2Q969R8 447 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 CDCA4Q9BXL8 241 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 CLEC4MQ9H2X3 399 aaPredicted RBP10.75□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF442Q9H7R0 627 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 PLEKHF2Q9H8W4 249 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 MRM2Q9UI43 246 aaKnown RBP10.75□□□□□ -0.69
LINC00963-216ENST00000623185 POU2F3Q9UKI9 436 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 IKZF2Q9UKS7 526 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 BLOC1S6Q9UL45 172 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 STARD10Q9Y365 291 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 CAB39Q9Y376 341 aaPredicted RBP10.75□□□□□ -0.69
LINC00963-216ENST00000623185 LRP12Q9Y561 859 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 PCDHGB5Q9Y5G0 923 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 ATP23Q9Y6H3 246 aa10.75□□□□□ -0.69
LINC00963-216ENST00000623185 ICE1Q9Y2F5 2266 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 COL12A1Q99715 3063 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 TENM4Q6N022 2769 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 TMEM269A0A1B0GVZ9 245 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 PRR32B1ATL7 298 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 E7EQL1 145 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 MRPS14O60783 128 aaKnown RBP10.74□□□□□ -0.69
LINC00963-216ENST00000623185 SMPD2O60906 423 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 LCATP04180 440 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 CDK1P06493 297 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 LIMS3P0CW19 117 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 LIMS4P0CW20 117 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 MYL12AP19105 171 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 C21orf33P30042 268 aaPredicted RBP10.74□□□□□ -0.69
LINC00963-216ENST00000623185 EVX1P49640 407 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 RPS23P62266 143 aaKnown RBP10.74□□□□□ -0.69
LINC00963-216ENST00000623185 MVKQ03426 396 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 SPOCK1Q08629 439 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 MRPL28Q13084 256 aaKnown RBP10.74□□□□□ -0.69
LINC00963-216ENST00000623185 LIPNQ5VXI9 398 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 TMPRSS11AQ6ZMR5 421 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 AHSA2Q719I0 299 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF101Q8IZC7 436 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF786Q8N393 782 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 RFLNBQ8N5W9 214 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF283Q8N7M2 679 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 OR52H1Q8NGJ2 320 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 OR1J1Q8NGS3 322 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 TMEM171Q8WVE6 324 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 AKAP1Q92667 903 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC00963-216ENST00000623185 DHRS9Q9BPW9 319 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 ALG8Q9BVK2 526 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 CA10Q9NS85 328 aa10.74□□□□□ -0.69
LINC00963-216ENST00000623185 PRR14LQ5THK1 2151 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 A0A1W2PPR1 153 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 H3BSA7 217 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 PSMD9O00233 223 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 HS3ST1O14792 307 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 MAGEB4O15481 346 aaPredicted RBP10.73□□□□□ -0.69
LINC00963-216ENST00000623185 SRSF10O75494 262 aaKnown RBP10.73□□□□□ -0.69
LINC00963-216ENST00000623185 FAM157BP0CG42 384 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF250P15622 560 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 THBS4P35443 961 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 SLC6A9P48067 706 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 CX3CR1P49238 355 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 ETV1P50549 477 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 OR12D2P58182 307 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 PPP1CBP62140 327 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF829Q3KNS6 432 aaPredicted RBP10.73□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF718Q3SXZ3 478 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 MBNL2Q5VZF2 373 aaKnown RBP10.73□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF787Q6DD87 383 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 RGS7BPQ6MZT1 257 aaPredicted RBP10.73□□□□□ -0.69
LINC00963-216ENST00000623185 FDX2Q6P4F2 183 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 NANOGP1Q8N7R0 232 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 ZNF611Q8N823 705 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 YIPF7Q8N8F6 280 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 KBTBD8Q8NFY9 601 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 ABHD4Q8TB40 342 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 FBXW5Q969U6 566 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 HAVCR1Q96D42 359 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 MARS2Q96GW9 593 aaKnown RBP10.73□□□□□ -0.69
LINC00963-216ENST00000623185 DOK1Q99704 481 aa10.73□□□□□ -0.69
LINC00963-216ENST00000623185 RHNO1Q9BSD3 238 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms