RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PLP2Q04941 152 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 TPBGQ13641 420 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 CCDC58Q4VC31 144 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 RPL22L1Q6P5R6 122 aaKnown RBP15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 ARL9Q6T311 187 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 ZNF283Q8N7M2 679 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 CPEB3Q8NE35 698 aaKnown RBP15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 STEAP2Q8NFT2 490 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 SPTSSAQ969W0 71 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 RNF166Q96A37 237 aaPredicted RBP15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 KCNJ15Q99712 375 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 PLGRKTQ9HBL7 147 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 R4GMQ9 66 aa15.52■□□□□ 0.08
PTCHD3-202ENST00000622555 PRR14LQ5THK1 2151 aa15.52■□□□□ 0.07
PTCHD3-202ENST00000622555 TRBV2A0A0J9YWF9 115 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 IQCMA0A1B0GVH7 501 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 TMEM269A0A1B0GVZ9 245 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 F5H5K5 113 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 CCRL2O00421 344 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 CLPXO76031 633 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 APEX1P27695 318 aaKnown RBP15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 DCTDP32321 178 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 CX3CR1P49238 355 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 NANOS3P60323 173 aaKnown RBP15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 MFGE8Q08431 387 aaPredicted RBP15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 CDK5R1Q15078 307 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 SSX1Q16384 188 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 PHC2Q8IXK0 858 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 OR2G2Q8NGZ5 317 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 ACTR6Q9GZN1 396 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 OBP2BQ9NPH6 170 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 BRD7Q9NPI1 651 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 AMDHD2Q9Y303 409 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 FAM208BQ5VWN6 2430 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 LOC110117498-PIK3R3F6TDL0 507 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 C16orf97H3BN30 126 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 OGG1O15527 345 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 SRSF10O75494 262 aaKnown RBP15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 PNPP00491 289 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 DBHP09172 617 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 CRYGSP22914 178 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 UGT2B10P36537 528 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 SLC6A9P48067 706 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 PSMA6P60900 246 aaKnown RBP15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 SLC3A1Q07837 685 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 ALKBH1Q13686 389 aaKnown RBP15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 TIMM23BQ5SRD1 257 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 DMKNQ6E0U4 476 aaPredicted RBP15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 ZNF544Q6NX49 715 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 LILRB4Q8NHJ6 448 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 DYNC2LI1Q8TCX1 351 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 CA5BP1Q8WTZ4 195 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 ATPIF1Q9UII2 106 aa15.51■□□□□ 0.07
PTCHD3-202ENST00000622555 M0R135 149 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 AGFG2O95081 481 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 COX5BP10606 129 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 CCKARP32238 428 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 GDI2P50395 445 aaKnown RBP15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 TPTEP56180 551 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 ZNF121P58317 390 aaPredicted RBP15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 RSPO1Q2MKA7 263 aaPredicted RBP15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 FDX2Q6P4F2 183 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 PRSS35Q8N3Z0 413 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 SMIM19Q96E16 107 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 ZNF799Q96GE5 643 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 C4orf45Q96LM5 186 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 C1QTNF6Q9BXI9 259 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 NDUFB11Q9NX14 153 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 FAM206AQ9NX38 181 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 FRRS1LQ9P0K9 344 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 N6AMT1Q9Y5N5 214 aa15.5■□□□□ 0.07
PTCHD3-202ENST00000622555 NKX2-6A6NCS4 301 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 PLPP2O43688 288 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 APOC1P02654 83 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 ANXA2P07355 339 aaKnown RBP15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 SLC2A1P11166 492 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 CBR1P16152 277 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 STOMP27105 288 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 OTX1P32242 354 aaPredicted RBP15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 KIR3DL2P43630 455 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 MMP16P51512 607 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 IDH3GP51553 393 aaPredicted RBP15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 GPR50Q13585 617 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 WDR38Q5JTN6 314 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 BCL2L15Q5TBC7 163 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 CATSPERDQ86XM0 798 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 ZNF584Q8IVC4 421 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 CROCCP3Q8IVE0 287 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 NDNFQ8TB73 568 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 RPL3LQ92901 407 aaKnown RBP15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 MUCL1Q96DR8 90 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 MS4A3Q96HJ5 214 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 ZNF75AQ96N20 296 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 DACH2Q96NX9 599 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 OR52A1Q9UKL2 312 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 SLC22A13Q9Y226 551 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 SLC25A15Q9Y619 301 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 ZNF462Q96JM2 2506 aa15.49■□□□□ 0.07
PTCHD3-202ENST00000622555 LOC100509620A0A075B734 347 aa15.48■□□□□ 0.07
PTCHD3-202ENST00000622555 SERPINA5P05154 406 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms