RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NKX3-1Q99801 234 aaPredicted RBP8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 PBOV1Q9GZY1 135 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 SLC25A32Q9H2D1 315 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 PPA2Q9H2U2 334 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 TTYH1Q9H313 450 aaPredicted RBP8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 CNTD2Q9H8S5 307 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 MOB1AQ9H8S9 216 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 SDHAF3Q9NRP4 125 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 SERINC1Q9NRX5 453 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 CENPMQ9NSP4 180 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 B3GAT1Q9P2W7 334 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 CA14Q9ULX7 337 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 VSIG4Q9Y279 399 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 RPH3AQ9Y2J0 694 aaPredicted RBP8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 RP1P56715 2156 aa8.56□□□□□ -1.04
IGHV3-54-201ENST00000622166 TRBV11-1A0A0K0K1C0 115 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 C2orf72A6NCS6 295 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 TMEM235A6NFC5 223 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 SYT7O43581 403 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR2F2O95006 317 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 HPP00738 406 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 ERCC1P07992 297 aaPredicted RBP8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 CHRM2P08172 466 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 CYC1P08574 325 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 VSIG8P0DPA2 414 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 PNLIPP16233 465 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 NAT1P18440 290 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 CD34P28906 385 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 NUP62P37198 522 aaPredicted RBP8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 P2RY4P51582 365 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 BIDP55957 195 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 CLDN6P56747 220 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 TAGLNQ01995 201 aaKnown RBP8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 DHRS2Q13268 280 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 UNC119Q13432 240 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR2F1Q13607 317 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 ZNF345Q14585 488 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 PLPPR5Q32ZL2 321 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 NKAIN1Q4KMZ8 207 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 RNASE10Q5GAN6 216 aaKnown RBP8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 TMEM71Q6P5X7 295 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 C11orf88Q6PI97 169 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 ARSKQ6UWY0 536 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 ALKAL2Q6UX46 152 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 C16orf47Q6ZP98 133 aaPredicted RBP8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 TRAPPC6BQ86SZ2 158 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 PDZD9Q8IXQ8 264 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 ACBD4Q8NC06 268 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 NOXO1Q8NFA2 376 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR52N4Q8NGI2 321 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 OR1J2Q8NGS2 313 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 ZBTB8AQ96BR9 441 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 ADAT3Q96EY9 351 aaPredicted RBP8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 LINC00052Q96N35 136 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 DMRTA2Q96SC8 542 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 WDR77Q9BQA1 342 aaPredicted RBP8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 NUDT22Q9BRQ3 303 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 SHARPINQ9H0F6 387 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 DUSP15Q9H1R2 295 aaPredicted RBP8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 MED29Q9NX70 200 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 PPP4R1LQ9P1A2 415 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 GLS2Q9UI32 602 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 TNFSF18Q9UNG2 199 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 HRH3Q9Y5N1 445 aa8.55□□□□□ -1.04
IGHV3-54-201ENST00000622166 LOC102725191A0A1B0GVB3 256 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 A0A1B0GW55 424 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 D6RAR5 112 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 BCAT2O15382 392 aaPredicted RBP8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 ZFAND5O76080 213 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 DKK1O94907 266 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 FCER2P06734 321 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 GSTP1P09211 210 aaKnown RBP8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 DUX4L2P0CJ85 424 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 DUX4L3P0CJ86 424 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 DUX4L4P0CJ87 422 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 DUX4L5P0CJ88 424 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 DUX4L6P0CJ89 424 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 DUX4L7P0CJ90 424 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 PGA4P0DJD7 388 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 PGA3P0DJD8 388 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 RAB3AP20336 220 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 BCKDHBP21953 392 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 CCL1P22362 96 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 CD96P40200 585 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 ZNF41P51814 821 aaPredicted RBP8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 EMP2P54851 167 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 STARD6P59095 220 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 CXADRP78310 365 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 FOXK1P85037 733 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 MYBPHQ13203 477 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 SHBQ15464 509 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 ZNF385CQ66K41 422 aaPredicted RBP8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 LIN54Q6MZP7 749 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 C11orf87Q6NUJ2 197 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 SHISA6Q6ZSJ9 500 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 TMPRSS9Q7Z410 1059 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 TMED4Q7Z7H5 227 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 ZNF546Q86UE3 836 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 UEVLDQ8IX04 471 aa8.54□□□□□ -1.04
IGHV3-54-201ENST00000622166 BEST3Q8N1M1 668 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms