RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SPATC1Q76KD6 591 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 RHOUQ7L0Q8 258 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF771Q7L3S4 317 aaPredicted RBP12.26□□□□□ -0.45
CBWD3-217ENST00000621474 LRRC75A-AS1Q8N1F1 130 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 ZCCHC24Q8N2G6 241 aaKnown RBP12.26□□□□□ -0.45
CBWD3-217ENST00000621474 IPCEF1Q8WWN9 437 aaPredicted RBP12.26□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF799Q96GE5 643 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 ELOVL3Q9HB03 270 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 ITPR3Q14573 2671 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 J3QW42 95 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 IGHV4-39P01824 125 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 SBK2P0C263 348 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 OCLNQ16625 522 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 SNAI3Q3KNW1 292 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 PRSS45Q7RTY3 260 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF454Q8N9F8 522 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 OR51G2Q8NGK0 314 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 RHOXF1Q8NHV9 184 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 SORCS2Q96PQ0 1159 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 CNN2Q99439 309 aaKnown RBP12.26□□□□□ -0.45
CBWD3-217ENST00000621474 KCNJ15Q99712 375 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 COPS4Q9BT78 406 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 YIPF3Q9GZM5 350 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 CENPMQ9NSP4 180 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 H2AFY2Q9P0M6 372 aaPredicted RBP12.26□□□□□ -0.45
CBWD3-217ENST00000621474 WARS2Q9UGM6 360 aaKnown RBP12.26□□□□□ -0.45
CBWD3-217ENST00000621474 DUSP13Q9UII6 198 aa12.26□□□□□ -0.45
CBWD3-217ENST00000621474 H0YHG0 523 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 APOL3O95236 402 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 IGHV3-13P01766 116 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 ALDH3B1P43353 468 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 RGS6P49758 472 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 PPOXP50336 477 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 SNRPD2P62316 118 aaKnown RBP12.25□□□□□ -0.45
CBWD3-217ENST00000621474 RIPK1Q13546 671 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 MAD2L1BPQ15013 274 aaPredicted RBP12.25□□□□□ -0.45
CBWD3-217ENST00000621474 ALKBH6Q3KRA9 238 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF691Q5VV52 312 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 ARL9Q6T311 187 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 C1orf174Q8IYL3 243 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 SYNPRQ8TBG9 265 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 THEM6Q8WUY1 208 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 APOBEC3DQ96AK3 386 aaPredicted RBP12.25□□□□□ -0.45
CBWD3-217ENST00000621474 LAMP5Q9UJQ1 280 aa12.25□□□□□ -0.45
CBWD3-217ENST00000621474 PSMD9O00233 223 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 WBP4O75554 376 aaKnown RBP12.24□□□□□ -0.45
CBWD3-217ENST00000621474 GNAO1P09471 354 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 SLC2A1P11166 492 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 MMP15P51511 669 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 PRKXP51817 358 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 NUDT6P53370 316 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 ATP5J2P56134 94 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 TPTEP56180 551 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 KLF3P57682 345 aaPredicted RBP12.24□□□□□ -0.45
CBWD3-217ENST00000621474 PSG7Q13046 419 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 HLXQ14774 488 aaPredicted RBP12.24□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF718Q3SXZ3 478 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 MEDAGQ5VYS4 303 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 LRRN1Q6UXK5 716 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 UNQ6126/PRO20091Q6UXV3 157 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 SSX6Q7RTT6 188 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF555Q8NEP9 628 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 GTF3AQ92664 365 aaKnown RBP12.24□□□□□ -0.45
CBWD3-217ENST00000621474 SPTSSAQ969W0 71 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 ADI1Q9BV57 179 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 TTTY10Q9BZA0 68 aa12.24□□□□□ -0.45
CBWD3-217ENST00000621474 VSTM5A8MXK1 200 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 H3BSA7 217 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 J3QRE1 110 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 M0R233 179 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 LY6HO94772 140 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 ATP6V1G2O95670 118 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 PRSS12P56730 875 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 CXCR4P61073 352 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 GRB2P62993 217 aaKnown RBP12.23□□□□□ -0.45
CBWD3-217ENST00000621474 ROM1Q03395 351 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 TMED1Q13445 227 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 DRAM2Q6UX65 266 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 FBXW12Q6X9E4 464 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 SLC35F2Q8IXU6 374 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 DHRSXQ8N5I4 330 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 WFDC11Q8NEX6 87 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 CYGBQ8WWM9 190 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 RFKQ969G6 155 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 CLN6Q9NWW5 311 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 SLCO1C1Q9NYB5 712 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 TAAR3PQ9P1P4 343 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 ZNF319Q9P2F9 582 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.23□□□□□ -0.45
CBWD3-217ENST00000621474 LRP12Q9Y561 859 aa12.23□□□□□ -0.45
CBWD3-217ENST00000621474 MAGEB4O15481 346 aaPredicted RBP12.22□□□□□ -0.45
CBWD3-217ENST00000621474 MPZL2O60487 215 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 ADRA2AP08913 450 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 NAT2P11245 290 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 TUBG1P23258 451 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 SLC15A1P46059 708 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 MTNR1AP48039 350 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 SLC6A9P48067 706 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 CX3CR1P49238 355 aa12.22□□□□□ -0.45
CBWD3-217ENST00000621474 AQP4P55087 323 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms