RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 MMP16P51512 607 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 TSPAN31Q12999 210 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 ECH1Q13011 328 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 ZBTB46Q86UZ6 589 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 LINC00346Q8IVM7 164 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 ZDHHC21Q8IVQ6 265 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 MUC20Q8N307 709 aaPredicted RBP20.21■□□□□ 0.83
ATXN3-253ENST00000621269 SDR9C7Q8NEX9 313 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 FAM216AQ8WUB2 273 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 RBM4Q9BWF3 364 aaKnown RBP20.21■□□□□ 0.83
ATXN3-253ENST00000621269 ARL8BQ9NVJ2 186 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 ARL2BPQ9Y2Y0 163 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 F5H5K5 113 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 SELEP16581 610 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 SPATS1Q496A3 300 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 SLC35F1Q5T1Q4 408 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 SLC18B1Q6NT16 456 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 CFAP77Q6ZQR2 320 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 DEFB107AQ8IZN7 70 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 BHLHE23Q8NDY6 225 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 OR52E2Q8NGJ4 325 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 MEGF10Q96KG7 1140 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 ATF6BQ99941 703 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 FN3KQ9H479 309 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 WDR76Q9H967 626 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 MMP26Q9NRE1 261 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 TMEM100Q9NV29 134 aa20.2■□□□□ 0.82
ATXN3-253ENST00000621269 OR6C68A6NDL8 312 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 IQCF6A8MYZ5 107 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 DCTN3O75935 186 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 KRT36O76013 467 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 GNGT1P63211 74 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.19■□□□□ 0.82
ATXN3-253ENST00000621269 DBPQ10586 325 aaPredicted RBP20.19■□□□□ 0.82
ATXN3-253ENST00000621269 RSPO1Q2MKA7 263 aaPredicted RBP20.19■□□□□ 0.82
ATXN3-253ENST00000621269 ESCO2Q56NI9 601 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 PGBD2Q6P3X8 592 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 ZNF620Q6ZNG0 422 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 COLCA1Q6ZS62 124 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 OR52L1Q8NGH7 329 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 GCDHQ92947 438 aaPredicted RBP20.19■□□□□ 0.82
ATXN3-253ENST00000621269 POP5Q969H6 163 aaKnown RBP20.19■□□□□ 0.82
ATXN3-253ENST00000621269 SLC30A2Q9BRI3 323 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 C1QTNF5Q9BXJ0 243 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 POLR3KQ9Y2Y1 108 aaPredicted RBP20.19■□□□□ 0.82
ATXN3-253ENST00000621269 AUP1Q9Y679 476 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 ANK2Q01484 3957 aa20.19■□□□□ 0.82
ATXN3-253ENST00000621269 DYSFO75923 2080 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 LRRC30A6NM36 301 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 H0YL77 283 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 FSHBP01225 129 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 ACSM4P0C7M7 580 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 ZNF823P16415 610 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 SEC61A1P61619 476 aaKnown RBP20.18■□□□□ 0.82
ATXN3-253ENST00000621269 MALLQ13021 153 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 ZNF154Q13106 437 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 ARMCX4Q5H9R4 360 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 CLEC12AQ5QGZ9 265 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 RPL13AP3Q6NVV1 102 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 DEFB108BQ8NET1 73 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 ZNF420Q8TAQ5 688 aaPredicted RBP20.18■□□□□ 0.82
ATXN3-253ENST00000621269 C22orf15Q8WYQ4 148 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 MRI1Q9BV20 369 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 EGLN3Q9H6Z9 239 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 NTN4Q9HB63 628 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 OR5V1Q9UGF6 321 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 CYB5R1Q9UHQ9 305 aa20.18■□□□□ 0.82
ATXN3-253ENST00000621269 F5H0A9 414 aaPredicted RBP20.17■□□□□ 0.82
ATXN3-253ENST00000621269 F5H5P2 479 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 TRAPPC2LH3BP13 241 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 LCATP04180 440 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 CFPP27918 469 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 GGT2P36268 569 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 TRAP1Q12931 704 aaKnown RBP20.17■□□□□ 0.82
ATXN3-253ENST00000621269 KRTAP27-1Q3LI81 207 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 RBMS3Q6XE24 437 aaKnown RBP20.17■□□□□ 0.82
ATXN3-253ENST00000621269 MOGAT3Q86VF5 341 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 LINC00471Q8N535 108 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 KCNG2Q9UJ96 466 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 LRCH1Q9Y2L9 728 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 INSIG2Q9Y5U4 225 aa20.17■□□□□ 0.82
ATXN3-253ENST00000621269 IGHV3-64DA0A0J9YX35 117 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 CEACAM18A8MTB9 384 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 A8MXK9 166 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 TNFRSF11BO00300 401 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 MLNRO43193 412 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 CYB5R3P00387 301 aaPredicted RBP20.16■□□□□ 0.82
ATXN3-253ENST00000621269 ZNF12P17014 697 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 CPT2P23786 658 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 MNAT1P51948 309 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 GYS2P54840 703 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 TPTEP56180 551 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 GK2Q14410 553 aaPredicted RBP20.16■□□□□ 0.82
ATXN3-253ENST00000621269 PIGWQ7Z7B1 504 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 C1orf87Q8N0U7 546 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 PROKR2Q8NFJ6 384 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 CDH10Q9Y6N8 788 aa20.16■□□□□ 0.82
ATXN3-253ENST00000621269 ZNF205O95201 554 aa20.15■□□□□ 0.82
ATXN3-253ENST00000621269 WNT2P09544 360 aa20.15■□□□□ 0.82
ATXN3-253ENST00000621269 RPS2P15880 293 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms