RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ABCD3P28288 659 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 EGR3Q06889 387 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 RNPS1Q15287 305 aaKnown RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 IAH1Q2TAA2 248 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 ACER2Q5QJU3 275 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 TMEM102Q8N9M5 508 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 OR2AK2Q8NG84 335 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 SMAP2Q8WU79 429 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 GNG13Q9P2W3 67 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 GDF2Q9UK05 429 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 A0A0D9SG52 128 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 TERTO14746 1132 aaKnown RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 SNRNP70P08621 437 aaKnown RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 CHRNB1P11230 501 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 POU4F3Q15319 338 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 SMIM21Q3B7S5 101 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 RFPL4BQ6ZWI9 263 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 SIAH3Q8IW03 269 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 PLPP5Q8NEB5 264 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 OR2Z1Q8NG97 314 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 OR10G3Q8NGC4 313 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 OR6K3Q8NGY3 331 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 MTCH1Q9NZJ7 389 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 KCNG2Q9UJ96 466 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 A0A1W2PR80 420 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 M0QZ24 198 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 HOXD11P31277 338 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 SOX18P35713 384 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 ETV1P50549 477 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 RAP2BP61225 183 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 OTPQ5XKR4 325 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 GALNT16Q8N428 558 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 CORO2AQ92828 525 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 PKMYT1Q99640 499 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 FOXB1Q99853 325 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 GABRG3Q99928 467 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 GPATCH2Q9NW75 528 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 FBXL2Q9UKC9 423 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 FZR1Q9UM11 496 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 CLEC2LP0C7M8 214 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 TNFRSF1AP19438 455 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 DOC2BQ14184 412 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 PSD2Q9BQI7 771 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 NAA50Q9GZZ1 169 aaKnown RBP10.3□□□□□ -0.76
CLIP1-219ENST00000620786 TAS2R5Q9NYW4 299 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 KLK4Q9Y5K2 254 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 COL18A1P39060 1754 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 STRCQ7RTU9 1775 aa10.3□□□□□ -0.76
CLIP1-219ENST00000620786 PPIHO43447 177 aaKnown RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 FADS1O60427 444 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 UBE2G2P60604 165 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 Q6ZRG5 221 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 PINX1Q96BK5 328 aaKnown RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 FAM212BQ9NTI7 297 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 K7EQS6 105 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 NANOGP1Q8N7R0 232 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 SLC39A7Q92504 469 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 CNRIP1Q96F85 164 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 TRMT61AQ96FX7 289 aaKnown RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 ARV1Q9H2C2 271 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 PLK3Q9H4B4 646 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 LAMA4Q16363 1823 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 FITM1A5D6W6 292 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 SH2D7A6NKC9 451 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 AIPO00170 330 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 CSN1S1P47710 185 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 DIO1P49895 249 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF121P58317 390 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 MC2RQ01718 297 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 RHOXF1Q8NHV9 184 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 SPACA5Q96QH8 159 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 NCBP2LA6PVI3 153 aaKnown RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 HBE1P02100 147 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 GPM6AP51674 278 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 SLC35A2P78381 396 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 TMEM215Q68D42 235 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 LACC1Q8IV20 430 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF2Q9BSG1 426 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 SAMD10Q9BYL1 202 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 HINT3Q9NQE9 182 aaKnown RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 FAM221AA4D161 298 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 ELK1P19419 428 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 MPPED2Q15777 294 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 SOWAHCQ53LP3 525 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 JMJD6Q6NYC1 403 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 MOB3BQ86TA1 216 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 SLC38A9Q8NBW4 561 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 OR51A4Q8NGJ6 313 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 GNRHR2Q96P88 292 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 ZNF436Q9C0F3 470 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-219ENST00000620786 C20orf85Q9H1P6 137 aa10.29□□□□□ -0.76
CLIP1-219ENST00000620786 ACOT8O14734 319 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 ATP1B1P05026 303 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 HOXC4P09017 264 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 RAB1AP62820 205 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 KIRREL2Q6UWL6 708 aa10.28□□□□□ -0.76
CLIP1-219ENST00000620786 CXorf67Q86X51 503 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 FYTTD1Q96QD9 318 aaKnown RBP10.28□□□□□ -0.76
CLIP1-219ENST00000620786 ADAT1Q9BUB4 502 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms