RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 AFF3P51826 1226 aaKnown RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 CLDN12P56749 244 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 ST3GAL3Q11203 375 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 NR0B2Q15466 257 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 ZNF77Q15935 545 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 ZNF311Q5JNZ3 666 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 LSRQ86X29 649 aaPredicted RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 FAM129CQ86XR2 697 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 FAM160A2Q8N612 972 aaPredicted RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 ZNF321PQ8N8H1 164 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 MFSD9Q8NBP5 474 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 OR13C2Q8NGS9 318 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 HLA-CQ95604 372 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 FAAP24Q9BTP7 215 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 MS4A8Q9BY19 250 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 MED20Q9H944 212 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 BCL2L10Q9HD36 194 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 NOX4Q9NPH5 578 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 NTNG1Q9Y2I2 539 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 GPR55Q9Y2T6 319 aaPredicted RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 INSL6Q9Y581 213 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 NOTCH4Q99466 2003 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 FEZF1A0PJY2 475 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 EIF1AYO14602 144 aaKnown RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 TAAR5O14804 337 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 PIN1P1O15428 100 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 TSPAN15O95858 294 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 RPN2P04844 631 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 FCARP24071 287 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 EIF1AXP47813 144 aaKnown RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 NCBP2P52298 156 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS11-207ENST00000620429 FUT5Q11128 374 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 C1orf194Q5T5A4 169 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 NRMQ8IXM6 262 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 DND1Q8IYX4 353 aaKnown RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 GCNT2Q8N0V5 402 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 GABRG1Q8N1C3 465 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SLC35G3Q8N808 338 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 NUDT10Q8NFP7 164 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SEMA6DQ8NFY4 1073 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 OR4C6Q8NH72 309 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SFXN5Q8TD22 340 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 CD300LFQ8TDQ1 290 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 THOC3Q96J01 351 aaKnown RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 C5orf34Q96MH7 638 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 MYADMQ96S97 322 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 NRTNQ99748 197 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 TAF9BQ9HBM6 251 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 DNAJC4Q9NNZ3 241 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 GNG8Q9UK08 70 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 FARSAQ9Y285 508 aaKnown RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 A6NJY4 79 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 GLOD5A6NK44 160 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 KLF4O43474 513 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 ZNF432O94892 652 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 GPANK1O95872 356 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 ELFN1P0C7U0 828 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 TMIGD3P0DMS9 266 aaPredicted RBP9.32□□□□□ -0.92
VPS11-207ENST00000620429 RAB6AP20340 208 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 TLX1P31314 330 aaPredicted RBP9.32□□□□□ -0.92
VPS11-207ENST00000620429 ID4P47928 161 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 ACTC1P68032 377 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 ACTA1P68133 377 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 CYCSP99999 105 aaKnown RBP9.32□□□□□ -0.92
VPS11-207ENST00000620429 RASGEF1BQ0VAM2 473 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 C17orf64Q86WR6 236 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 SFTPA1Q8IWL2 248 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 C12orf76Q8N812 135 aaPredicted RBP9.32□□□□□ -0.92
VPS11-207ENST00000620429 AMER3Q8N944 861 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 OR14K1Q8NGZ2 314 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 OIT3Q8WWZ8 545 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 DIO2Q92813 273 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 EXTL1Q92935 676 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 ZG16BQ96DA0 208 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 RSPRY1Q96DX4 576 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 SLC41A3Q96GZ6 507 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 PHB2Q99623 299 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 GPR87Q9BY21 358 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 OR8D2Q9GZM6 311 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 SLC5A7Q9GZV3 580 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 TAC3Q9UHF0 121 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 NUP210Q8TEM1 1887 aaPredicted RBP9.32□□□□□ -0.92
VPS11-207ENST00000620429 CCDC163A0A0D9SF12 145 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 PRR33A8MZF0 331 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 SMAD9O15198 467 aaKnown RBP9.32□□□□□ -0.92
VPS11-207ENST00000620429 GPRIN2O60269 458 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 ERAL1O75616 437 aaKnown RBP9.32□□□□□ -0.92
VPS11-207ENST00000620429 HMGN2P05204 90 aaKnown RBP9.32□□□□□ -0.92
VPS11-207ENST00000620429 IRF2P14316 349 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 IGFBP4P22692 258 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 SLC16A1P53985 500 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 ACTBP60709 375 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 ACTG1P63261 375 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 PAX5Q02548 391 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 TMEM268Q5VZI3 342 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 TMEM205Q6UW68 189 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 TIPARPQ7Z3E1 657 aaKnown RBP9.32□□□□□ -0.92
VPS11-207ENST00000620429 P4HA3Q7Z4N8 544 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 SLC25A42Q86VD7 318 aa9.32□□□□□ -0.92
VPS11-207ENST00000620429 ZNF433Q8N7K0 673 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms