RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 DEFB108BQ8NET1 73 aa18.53■□□□□ 0.56
SRRT-218ENST00000620394 OR5L1Q8NGL2 311 aa18.53■□□□□ 0.56
SRRT-218ENST00000620394 NMNAT3Q96T66 252 aa18.53■□□□□ 0.56
SRRT-218ENST00000620394 C7orf69Q9H7B7 122 aa18.53■□□□□ 0.56
SRRT-218ENST00000620394 PPP1R3CQ9UQK1 317 aa18.53■□□□□ 0.56
SRRT-218ENST00000620394 FABP3P05413 133 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 HIST1H1CP16403 213 aaKnown RBP18.52■□□□□ 0.56
SRRT-218ENST00000620394 ZNF620Q6ZNG0 422 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 JAZF1Q86VZ6 243 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 KLHL36Q8N4N3 616 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 OR8G5Q8NG78 346 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 C22orf15Q8WYQ4 148 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 NSMCE2Q96MF7 247 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 GCM1Q9NP62 436 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 IL1RAPQ9NPH3 570 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 PTTG3PQ9NZH4 202 aa18.52■□□□□ 0.56
SRRT-218ENST00000620394 TGP01266 2768 aa18.52■□□□□ 0.55
SRRT-218ENST00000620394 IQCF6A8MYZ5 107 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 TMEM178BH3BS89 294 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 IFNL4K9M1U5 179 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 IDH3BO43837 385 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 OR10H3O60404 316 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 RENP00797 406 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 SBK2P0C263 348 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 RBMXP38159 391 aaKnown RBP18.51■□□□□ 0.55
SRRT-218ENST00000620394 MDH2P40926 338 aaKnown RBP18.51■□□□□ 0.55
SRRT-218ENST00000620394 RSPO1Q2MKA7 263 aaPredicted RBP18.51■□□□□ 0.55
SRRT-218ENST00000620394 SPATS1Q496A3 300 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 OR2T2Q6IF00 324 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 SLC18B1Q6NT16 456 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 SLC27A4Q6P1M0 643 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 CFAP77Q6ZQR2 320 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 OR5AS1Q8N127 324 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 OR4K13Q8NH42 304 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 DVL3Q92997 716 aaPredicted RBP18.51■□□□□ 0.55
SRRT-218ENST00000620394 MCUR1Q96AQ8 359 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 C1QTNF5Q9BXJ0 243 aa18.51■□□□□ 0.55
SRRT-218ENST00000620394 PRTN3P24158 256 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 RRM2P31350 389 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 IFNGR2P38484 337 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 SLC6A9P48067 706 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 TSPAN31Q12999 210 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 MIDNQ504T8 468 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 PGBD2Q6P3X8 592 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 CORO6Q6QEF8 472 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 MUC20Q8N307 709 aaPredicted RBP18.5■□□□□ 0.55
SRRT-218ENST00000620394 SIGLECL1Q8N7X8 197 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 OR10AD1Q8NGE0 317 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 OR13G1Q8NGZ3 307 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 POP5Q969H6 163 aaKnown RBP18.5■□□□□ 0.55
SRRT-218ENST00000620394 MEGF10Q96KG7 1140 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 SLC30A2Q9BRI3 323 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 IFT27Q9BW83 186 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 UNKLQ9H9P5 680 aaKnown RBP18.5■□□□□ 0.55
SRRT-218ENST00000620394 PNRC2Q9NPJ4 139 aaKnown RBP18.5■□□□□ 0.55
SRRT-218ENST00000620394 RPRD1BQ9NQG5 326 aaKnown RBP18.5■□□□□ 0.55
SRRT-218ENST00000620394 MMP26Q9NRE1 261 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 CYB5R1Q9UHQ9 305 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 TAGLN3Q9UI15 199 aa18.5■□□□□ 0.55
SRRT-218ENST00000620394 OR6C68A6NDL8 312 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 DNAJC9-AS1A6NH13 148 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 MLNRO43193 412 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 FSTL3O95633 263 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 ACSM4P0C7M7 580 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 ZNF12P17014 697 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 CPT2P23786 658 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 MSX2P35548 267 aaPredicted RBP18.49■□□□□ 0.55
SRRT-218ENST00000620394 GGT2P36268 569 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 CENPAP49450 140 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 SEC61A1P61619 476 aaKnown RBP18.49■□□□□ 0.55
SRRT-218ENST00000620394 ECH1Q13011 328 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 ZNF181Q2M3W8 571 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 SLC36A3Q495N2 470 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 DOK3Q7L591 496 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 CPLX4Q7Z7G2 160 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.49■□□□□ 0.55
SRRT-218ENST00000620394 ZNF582Q96NG8 517 aaPredicted RBP18.49■□□□□ 0.55
SRRT-218ENST00000620394 CDRT15Q96T59 188 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 ATF6BQ99941 703 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 SRA1Q9HD15 236 aaKnown RBP18.49■□□□□ 0.55
SRRT-218ENST00000620394 ARL8BQ9NVJ2 186 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 DOCK11Q5JSL3 2073 aa18.49■□□□□ 0.55
SRRT-218ENST00000620394 TRAPPC2LH3BP13 241 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 NOS3P29474 1203 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 SRP9P49458 86 aaKnown RBP18.48■□□□□ 0.55
SRRT-218ENST00000620394 HMGA2P52926 109 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 IL13RA1P78552 427 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 DBPQ10586 325 aaPredicted RBP18.48■□□□□ 0.55
SRRT-218ENST00000620394 ZNF154Q13106 437 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 ARMCX4Q5H9R4 360 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 LINC00346Q8IVM7 164 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 ATG16L2Q8NAA4 619 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 SDR9C7Q8NEX9 313 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 FN3KQ9H479 309 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 MRPL22Q9NWU5 206 aaKnown RBP18.48■□□□□ 0.55
SRRT-218ENST00000620394 NDE1Q9NXR1 346 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 KCNG2Q9UJ96 466 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 TMCC3Q9ULS5 477 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 LRCH1Q9Y2L9 728 aa18.48■□□□□ 0.55
SRRT-218ENST00000620394 INSIG2Q9Y5U4 225 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms