RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PDLIM4P50479 330 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 SELENOVP59797 346 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 GGTLC2Q14390 218 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 ALKBH6Q3KRA9 238 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 FAM209AQ5JX71 171 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 SPATA46Q5T0L3 261 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 PLBD1Q6P4A8 553 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 PRSS45Q7RTY3 260 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 DCXRQ7Z4W1 244 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 CPOQ8IVL8 374 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 FAM168AQ92567 244 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 SLAMF6Q96DU3 332 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 C1orf159Q96HA4 380 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 RAB3IPQ96QF0 476 aaPredicted RBP7.03□□□□□ -1.28
NEK3-209ENST00000618856 PITX2Q99697 317 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 SMR3AQ99954 134 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 RBM4BQ9BQ04 359 aaKnown RBP7.03□□□□□ -1.28
NEK3-209ENST00000618856 CDADC1Q9BWV3 514 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 SEMA6AQ9H2E6 1030 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 OR51B6Q9H340 312 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 GSX1Q9H4S2 264 aaPredicted RBP7.03□□□□□ -1.28
NEK3-209ENST00000618856 S100A14Q9HCY8 104 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 DYNLRB1Q9NP97 96 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 ENOPH1Q9UHY7 261 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 GPR160Q9UJ42 338 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 A0A1W2PPW3 197 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 ZSCAN5BA6NJL1 495 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 LY6G6DO95868 133 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 IGHV1-46P01743 117 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 HLA-DQA2P01906 255 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 ERCC1P07992 297 aaPredicted RBP7.02□□□□□ -1.29
NEK3-209ENST00000618856 ALOX5APP20292 161 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 ANOS1P23352 680 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 IGFBP5P24593 272 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 GCH1P30793 250 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 POLR2IP36954 125 aaKnown RBP7.02□□□□□ -1.29
NEK3-209ENST00000618856 OPRL1P41146 370 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 CRYBB2P43320 205 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 MAGEB1P43366 347 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 ZNF81P51508 661 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 SNAPC1Q16533 368 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 DRAM2Q6UX65 266 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 Q6ZR03 302 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 CXXC5Q7LFL8 322 aaKnown RBP7.02□□□□□ -1.29
NEK3-209ENST00000618856 DPY19L4Q7Z388 723 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.02□□□□□ -1.29
NEK3-209ENST00000618856 NAA40Q86UY6 237 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 ZNF454Q8N9F8 522 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 ZNF540Q8NDQ6 660 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 BBS1Q8NFJ9 593 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 OR5L1Q8NGL2 311 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 OR6K6Q8NGW6 343 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 OR2AJ1Q8NGZ0 328 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 OTOSQ8NHW6 89 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 TMEM163Q8TC26 289 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 UBASH3BQ8TF42 649 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 GTF3AQ92664 365 aaKnown RBP7.02□□□□□ -1.29
NEK3-209ENST00000618856 RDH5Q92781 318 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 YIPF5Q969M3 257 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 SPTSSAQ969W0 71 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 SPSB4Q96A44 273 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 DIRC2Q96SL1 478 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 INTS14Q96SY0 518 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 AMELYQ99218 206 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 TEAD3Q99594 435 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 KCNJ15Q99712 375 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 ABHD6Q9BV23 337 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 REPIN1Q9BWE0 567 aaKnown RBP7.02□□□□□ -1.29
NEK3-209ENST00000618856 TEX12Q9BXU0 123 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 TPK1Q9H3S4 243 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 TOR3AQ9H497 397 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 HAO2Q9NYQ3 351 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 TVP23BQ9NYZ1 205 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 KIF17Q9P2E2 1029 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 PURGQ9UJV8 347 aaKnown RBP7.02□□□□□ -1.29
NEK3-209ENST00000618856 ZDHHC8Q9ULC8 765 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 POLR1DQ9Y2S0 133 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 GRIP1Q9Y3R0 1128 aa7.02□□□□□ -1.29
NEK3-209ENST00000618856 CSPG4Q6UVK1 2322 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 FN1P02751 2386 aaKnown RBP7.01□□□□□ -1.29
NEK3-209ENST00000618856 YLPM1P49750 1951 aaKnown RBP7.01□□□□□ -1.29
NEK3-209ENST00000618856 IQCF6A8MYZ5 107 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 ZNF878C9JN71 531 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 M0R135 149 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 LILRA1O75019 489 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 MT-ND5P03915 603 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 SPARCP09486 303 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 ACHEP22303 614 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 USF1P22415 310 aaPredicted RBP7.01□□□□□ -1.29
NEK3-209ENST00000618856 COL8A2P25067 703 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 ALDH3A2P51648 485 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 TPTEP56180 551 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 TMEM33P57088 247 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 GK2Q14410 553 aaPredicted RBP7.01□□□□□ -1.29
NEK3-209ENST00000618856 NKPD1Q17RQ9 610 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 SNAI3Q3KNW1 292 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 ZMAT1Q5H9K5 638 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 SLC25A30Q5SVS4 291 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 NXNL2Q5VZ03 156 aa7.01□□□□□ -1.29
NEK3-209ENST00000618856 DEGS2Q6QHC5 323 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms