RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ANGPTL5Q86XS5 388 aa11.74□□□□□ -0.53
FOXN3-219ENST00000615335 TGIF2LXQ8IUE1 241 aa11.74□□□□□ -0.53
FOXN3-219ENST00000615335 COX18Q8N8Q8 333 aa11.74□□□□□ -0.53
FOXN3-219ENST00000615335 ABHD4Q8TB40 342 aa11.74□□□□□ -0.53
FOXN3-219ENST00000615335 FBXO17Q96EF6 278 aa11.74□□□□□ -0.53
FOXN3-219ENST00000615335 TMEM185BQ9H7F4 350 aa11.74□□□□□ -0.53
FOXN3-219ENST00000615335 UNKLQ9H9P5 680 aaKnown RBP11.74□□□□□ -0.53
FOXN3-219ENST00000615335 KLHL9Q9P2J3 617 aa11.74□□□□□ -0.53
FOXN3-219ENST00000615335 MED31Q9Y3C7 131 aa11.74□□□□□ -0.53
FOXN3-219ENST00000615335 A0A087X0M5 115 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 A0A1B0GX30 115 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 CDHR4A6H8M9 788 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 RIIAD1A6NNX1 92 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 J3QLW9 94 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 F12P00748 615 aaPredicted RBP11.73□□□□□ -0.53
FOXN3-219ENST00000615335 ANXA2P07355 339 aaKnown RBP11.73□□□□□ -0.53
FOXN3-219ENST00000615335 ZNF19P17023 458 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 NUTF2P61970 127 aaKnown RBP11.73□□□□□ -0.53
FOXN3-219ENST00000615335 RPS15P62841 145 aaKnown RBP11.73□□□□□ -0.53
FOXN3-219ENST00000615335 SSPNQ14714 243 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 SSX6Q7RTT6 188 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 BOLLQ8N9W6 283 aaKnown RBP11.73□□□□□ -0.53
FOXN3-219ENST00000615335 ZNF511Q8NB15 262 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 OR2Y1Q8NGV0 311 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 C8orf44Q96CB5 159 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 C4orf36Q96KX1 117 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 AUNIPQ9H7T9 357 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 FBXO34Q9NWN3 711 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 VSX1Q9NZR4 365 aaPredicted RBP11.73□□□□□ -0.53
FOXN3-219ENST00000615335 RCC2Q9P258 522 aaKnown RBP11.73□□□□□ -0.53
FOXN3-219ENST00000615335 C19orf25Q9UFG5 118 aaPredicted RBP11.73□□□□□ -0.53
FOXN3-219ENST00000615335 KCNE5Q9UJ90 142 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 SIGLEC7Q9Y286 467 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 KCNIP3Q9Y2W7 256 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 FREM2Q5SZK8 3169 aa11.73□□□□□ -0.53
FOXN3-219ENST00000615335 MARCH11A6NNE9 402 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 FMO6PO60774 539 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 ACTL6AO96019 429 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 CRYABP02511 175 aaKnown RBP11.72□□□□□ -0.53
FOXN3-219ENST00000615335 HCKP08631 526 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 CRABP1P29762 137 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 MRPS10P82664 201 aaKnown RBP11.72□□□□□ -0.53
FOXN3-219ENST00000615335 FUT7Q11130 342 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 SKP2Q13309 424 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 LINC00303Q3SY05 128 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 CDRT4Q8N9R6 151 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 SLC2A12Q8TD20 617 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 WNT2BQ93097 391 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 C3orf49Q96BT1 292 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
FOXN3-219ENST00000615335 OR10A5Q9H207 317 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 SEC61A2Q9H9S3 476 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 PARPBPQ9NWS1 579 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 TCFL5Q9UL49 500 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 FARSAQ9Y285 508 aaKnown RBP11.72□□□□□ -0.53
FOXN3-219ENST00000615335 SLC35A3Q9Y2D2 325 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 ANKRD61A6NGH8 418 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 OR6C76A6NM76 312 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 UMODP07911 640 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 HOXB5P09067 269 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 IFI6P09912 130 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 HOXA5P20719 270 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 DLSTP36957 453 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 GLP1RP43220 463 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 RPS18P62269 152 aaKnown RBP11.72□□□□□ -0.53
FOXN3-219ENST00000615335 ZNF85Q03923 595 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 AKIRIN2Q53H80 203 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 UBE2NLQ5JXB2 153 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 C11orf88Q6PI97 169 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 FIGNL1Q6PIW4 674 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 LINGO2Q7L985 606 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 CPEB2Q7Z5Q1 589 aaKnown RBP11.72□□□□□ -0.53
FOXN3-219ENST00000615335 ZNF321PQ8N8H1 164 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 SMPDL3BQ92485 455 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 STACQ99469 402 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 TMEM27Q9HBJ8 222 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 ADGRL4Q9HBW9 690 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 COPS7AQ9UBW8 275 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 ZMIZ1Q9ULJ6 1067 aa11.72□□□□□ -0.53
FOXN3-219ENST00000615335 TRAV27A0A087WT01 109 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 ANKRD20A5PA0PJZ0 165 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 CDRT15L2A8MXV6 281 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 CYC1P08574 325 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 RAB40ALP0C0E4 278 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 CLUP10909 449 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 CD79AP11912 226 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 ACVR1BP36896 505 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 CDX1P47902 265 aaPredicted RBP11.71□□□□□ -0.53
FOXN3-219ENST00000615335 OR12D2P58182 307 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 FOXC1Q12948 553 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 CRMP1Q14194 572 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 EXOSC6Q5RKV6 272 aaKnown RBP11.71□□□□□ -0.53
FOXN3-219ENST00000615335 TMEM205Q6UW68 189 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 PRSS45Q7RTY3 260 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 SLC36A1Q7Z2H8 476 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 GTPBP8Q8N3Z3 284 aaPredicted RBP11.71□□□□□ -0.53
FOXN3-219ENST00000615335 IL22RA1Q8N6P7 574 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 TEX19Q8NA77 164 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 C17orf47Q8NEP4 570 aa11.71□□□□□ -0.53
FOXN3-219ENST00000615335 OR51A7Q8NH64 312 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms